WormBase Tree Display for Gene: WBGene00008969
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| WBGene00008969 | SMap | S_parent | Sequence | F20C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cdc-50.B | Person_evidence | WBPerson1820 | |||||
| Sequence_name | F20C5.4 | ||||||||
| Molecular_name | F20C5.4 | ||||||||
| F20C5.4.1 | |||||||||
| CE03241 | |||||||||
| Other_name | CELE_F20C5.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | cdc-50.B | ||||||||
| DB_info | Database | AceView | gene | 4J531 | |||||
| WormQTL | gene | WBGene00008969 | |||||||
| WormFlux | gene | WBGene00008969 | |||||||
| NDB | locus_tag | CELE_F20C5.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008969|UniProtKB=Q19635 | |||||||
| family | PTHR10926 | ||||||||
| NCBI | gene | 184717 | |||||||
| RefSeq | protein | NM_069110.5 | |||||||
| TREEFAM | TREEFAM_ID | TF300873 | |||||||
| TrEMBL | UniProtAcc | Q19635 | |||||||
| UniProt_GCRP | UniProtAcc | Q19635 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 Jan 2020 11:43:42 | WBPerson1983 | Name_change | CGC_name | cdc-50.B | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cdc | ||||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00065366 | ||||||||
| 00065367 | |||||||||
| 00065368 | |||||||||
| 00065369 | |||||||||
| 00065370 | |||||||||
| 00065371 | |||||||||
| 00116769 | |||||||||
| Ortholog (49) | |||||||||
| Paralog | WBGene00019946 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012224 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Involved in innate immune response. Predicted to be located in Golgi apparatus; endoplasmic reticulum; and plasma membrane. Is an ortholog of human TMEM30B (transmembrane protein 30B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20C5.4 | |||||||
| Corresponding_transcript | F20C5.4.1 | ||||||||
| Other_sequence | BU586849.1 | ||||||||
| ALC00909_1 | |||||||||
| ES880218.1 | |||||||||
| AS01954 | |||||||||
| JO472614.1 | |||||||||
| Name_isotig03891 | |||||||||
| TLC00090_1 | |||||||||
| JI172846.1 | |||||||||
| Associated_feature | WBsf646189 | ||||||||
| WBsf660438 | |||||||||
| WBsf228738 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031162 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045089 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013607 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025970 | ||||||||
| Expr1149038 | |||||||||
| Expr2002775 | |||||||||
| Expr2020993 | |||||||||
| Drives_construct | WBCnstr00032559 | ||||||||
| Construct_product | WBCnstr00032559 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (146) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | IV | Position | 3.96126 | |||||
| Positive | Positive_clone | F20C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00053602 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
