WormBase Tree Display for Gene: WBGene00008891
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WBGene00008891 | SMap | S_parent | Sequence | F16H6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-42 | Person_evidence | WBPerson655 | |||
Sequence_name | F16H6.1 | ||||||
Molecular_name | F16H6.1 | ||||||
F16H6.1.1 | |||||||
CE18597 | |||||||
Other_name | CELE_F16H6.1 | Accession_evidence | NDB | BX284605 | |||
Public_name | clec-42 | ||||||
DB_info | Database | AceView | gene | 5S673 | |||
WormQTL | gene | WBGene00008891 | |||||
WormFlux | gene | WBGene00008891 | |||||
NDB | locus_tag | CELE_F16H6.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00008891|UniProtKB=Q9XV91 | |||||
family | PTHR22991 | ||||||
NCBI | gene | 180189 | |||||
RefSeq | protein | NM_075156.4 | |||||
TREEFAM | TREEFAM_ID | TF351663 | |||||
TrEMBL | UniProtAcc | Q9XV91 | |||||
UniProt_GCRP | UniProtAcc | Q9XV91 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (81) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (78) | |||||||
Paralog (52) | |||||||
Structured_description | Automated_description | Expressed in int1DL; int1DR; int1VL; int1VR; and neurons. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F16H6.1 | |||||
Corresponding_transcript | F16H6.1.1 | ||||||
Associated_feature | WBsf647675 | ||||||
WBsf1002843 | |||||||
WBsf1021424 | |||||||
WBsf233158 | |||||||
Experimental_info | RNAi_result | WBRNAi00031048 | Inferred_automatically | RNAi_primary | |||
WBRNAi00115655 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044829 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013428 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr3375 | ||||||
Expr15813 | |||||||
Expr15814 | |||||||
Expr1021726 | |||||||
Expr1148794 | |||||||
Expr2010175 | |||||||
Expr2028417 | |||||||
Drives_construct | WBCnstr00011372 | ||||||
WBCnstr00032613 | |||||||
WBCnstr00042533 | |||||||
Construct_product | WBCnstr00032613 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (224) | |||||||
Interaction (43) | |||||||
Map_info | Map | V | Position | 14.7815 | Error | 0.044228 | |
Positive | Positive_clone | F16H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00026629 | ||||||
WBPaper00038491 | |||||||
WBPaper00057576 | |||||||
WBPaper00061178 | |||||||
WBPaper00061236 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |