WormBase Tree Display for Gene: WBGene00008891
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| WBGene00008891 | SMap | S_parent | Sequence | F16H6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-42 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F16H6.1 | ||||||||
| Molecular_name | F16H6.1 | ||||||||
| F16H6.1.1 | |||||||||
| CE18597 | |||||||||
| Other_name | CELE_F16H6.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-42 | ||||||||
| DB_info | Database | AceView | gene | 5S673 | |||||
| WormQTL | gene | WBGene00008891 | |||||||
| WormFlux | gene | WBGene00008891 | |||||||
| NDB | locus_tag | CELE_F16H6.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008891|UniProtKB=Q9XV91 | |||||||
| family | PTHR22991 | ||||||||
| NCBI | gene | 180189 | |||||||
| RefSeq | protein | NM_075156.4 | |||||||
| TREEFAM | TREEFAM_ID | TF351663 | |||||||
| TrEMBL | UniProtAcc | Q9XV91 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XV91 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Apr 2005 13:53:46 | WBPerson2970 | Name_change | CGC_name | clec-42 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (81) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (78) | |||||||||
| Paralog (52) | |||||||||
| Structured_description | Automated_description | Expressed in int1DL; int1DR; int1VL; int1VR; and neurons. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16H6.1 | |||||||
| Corresponding_transcript | F16H6.1.1 | ||||||||
| Associated_feature | WBsf647675 | ||||||||
| WBsf1002843 | |||||||||
| WBsf1021424 | |||||||||
| WBsf233158 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031048 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00115655 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044829 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013428 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3375 | ||||||||
| Expr15813 | |||||||||
| Expr15814 | |||||||||
| Expr1021726 | |||||||||
| Expr1148794 | |||||||||
| Expr2010175 | |||||||||
| Expr2028417 | |||||||||
| Drives_construct | WBCnstr00011372 | ||||||||
| WBCnstr00032613 | |||||||||
| WBCnstr00042533 | |||||||||
| Construct_product | WBCnstr00032613 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (224) | |||||||||
| Interaction | WBInteraction000137268 | ||||||||
| WBInteraction000185339 | |||||||||
| WBInteraction000191937 | |||||||||
| WBInteraction000192549 | |||||||||
| WBInteraction000200854 | |||||||||
| WBInteraction000208466 | |||||||||
| WBInteraction000211470 | |||||||||
| WBInteraction000213476 | |||||||||
| WBInteraction000221078 | |||||||||
| WBInteraction000227322 | |||||||||
| WBInteraction000285101 | |||||||||
| WBInteraction000285725 | |||||||||
| WBInteraction000289212 | |||||||||
| WBInteraction000306180 | |||||||||
| WBInteraction000324426 | |||||||||
| WBInteraction000327869 | |||||||||
| WBInteraction000328502 | |||||||||
| WBInteraction000335042 | |||||||||
| WBInteraction000335393 | |||||||||
| WBInteraction000336825 | |||||||||
| WBInteraction000350764 | |||||||||
| WBInteraction000356993 | |||||||||
| WBInteraction000358791 | |||||||||
| WBInteraction000370696 | |||||||||
| WBInteraction000378563 | |||||||||
| WBInteraction000388523 | |||||||||
| WBInteraction000392026 | |||||||||
| WBInteraction000396626 | |||||||||
| WBInteraction000397802 | |||||||||
| WBInteraction000400114 | |||||||||
| WBInteraction000400433 | |||||||||
| WBInteraction000404575 | |||||||||
| WBInteraction000404797 | |||||||||
| WBInteraction000413307 | |||||||||
| WBInteraction000414637 | |||||||||
| WBInteraction000419272 | |||||||||
| WBInteraction000423595 | |||||||||
| WBInteraction000437038 | |||||||||
| WBInteraction000439435 | |||||||||
| WBInteraction000447457 | |||||||||
| WBInteraction000448771 | |||||||||
| WBInteraction000453840 | |||||||||
| WBInteraction000558048 | |||||||||
| Map_info | Map | V | Position | 14.7815 | Error | 0.044228 | |||
| Positive | Positive_clone | F16H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026629 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00057576 | |||||||||
| WBPaper00061178 | |||||||||
| WBPaper00061236 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
