WormBase Tree Display for Gene: WBGene00008794
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WBGene00008794 | SMap | S_parent | Sequence | F14D7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | spig-4 | Person_evidence | WBPerson260 | |||||
Sequence_name | F14D7.7 | ||||||||
Molecular_name | F14D7.7 | ||||||||
F14D7.7.1 | |||||||||
CE09385 | |||||||||
Other_name | CELE_F14D7.7 | Accession_evidence | NDB | BX284605 | |||||
Public_name | spig-4 | ||||||||
DB_info | Database | AceView | gene | 5O788 | |||||
WormQTL | gene | WBGene00008794 | |||||||
WormFlux | gene | WBGene00008794 | |||||||
NDB | locus_tag | CELE_F14D7.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008794|UniProtKB=Q19451 | |||||||
family | PTHR33272 | ||||||||
NCBI | gene | 184467 | |||||||
RefSeq | protein | NM_074144.2 | |||||||
TREEFAM | TREEFAM_ID | TF322318 | |||||||
TrEMBL | UniProtAcc | Q19451 | |||||||
UniProt_GCRP | UniProtAcc | Q19451 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | spig-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | spig | ||||||||
Allele | WBVar02123600 | ||||||||
WBVar01499621 | |||||||||
WBVar01500212 | |||||||||
WBVar01500213 | |||||||||
WBVar01499299 | |||||||||
WBVar01066633 | |||||||||
WBVar01499316 | |||||||||
WBVar01499698 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (14) | |||||||||
Paralog (19) | |||||||||
Structured_description | Automated_description | Enriched in AMshL; AMshR; amphid sheath cell; and hypodermis based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including methylmercuric chloride; Tunicamycin; and manganese chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4473) and Protein of unknown function DUF4473. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F14D7.7 | |||||||
Corresponding_transcript | F14D7.7.1 | ||||||||
Other_sequence | Tcir_isotig14724 | ||||||||
Associated_feature | WBsf234930 | ||||||||
Experimental_info | RNAi_result | WBRNAi00044605 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030943 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013282 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1148569 | ||||||||
Expr2002574 | |||||||||
Expr2020791 | |||||||||
Drives_construct | WBCnstr00032681 | ||||||||
Construct_product | WBCnstr00032681 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (174) | |||||||||
Interaction (9) | |||||||||
Map_info | Positive | Positive_clone | F14D7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 6.2274 | |||||||
Method | Gene |