WormBase Tree Display for Gene: WBGene00008707

WBGene00008707 SMap: S_parent: Sequence: F11E6
  Identity: Version: 2
    Name: CGC_name: epic-1 Person_evidence: WBPerson105
      Sequence_name: F11E6.3
      Molecular_name: F11E6.3
        F11E6.3.1
        CE19783
      Other_name: CELE_F11E6.3 Accession_evidence: NDB BX284604
      Public_name: epic-1
    DB_info: Database: AceView gene 4S414
        WormQTL gene WBGene00008707
        WormFlux gene WBGene00008707
        NDB locus_tag CELE_F11E6.3
        Panther gene CAEEL|WormBase=WBGene00008707|UniProtKB=Q9U3J8
          family PTHR36514
        NCBI gene 178533
        RefSeq protein NM_070715.9
        TREEFAM TREEFAM_ID TF322540
        TrEMBL UniProtAcc Q9U3J8
        UniProt_GCRP UniProtAcc Q9U3J8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 27 Oct 2021 12:29:35 WBPerson1983 Name_change: CGC_name: epic-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: epic
    Allele (50)
    RNASeq_FPKM (74)
    Ortholog: WBGene00023824 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00069557 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00162061 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00091683 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00125230 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g7962 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12083 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP28.g4230 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11393 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26894 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9328 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3925 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g29207 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7216 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00504.g11623 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-F11E6.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold70.g423 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00306.g9093 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_22901 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_22919 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_011953 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g15603 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40217700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g12918 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00044293 Caenorhabditis elegans From_analysis: Panther
      WBGene00019540 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including accessory cell; anterior hypodermis; germ line; rectal epithelial cell; and rectum based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-five chemicals including diallyl trisulfide; nicotinic acid; and rotenone based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F11E6.3
    Corresponding_transcript: F11E6.3.1
    Other_sequence (16)
    Associated_feature: WBsf668599
      WBsf999044
      WBsf1018988
  Experimental_info: RNAi_result: WBRNAi00008640 Inferred_automatically: RNAi_primary
      WBRNAi00060896 Inferred_automatically: RNAi_primary
      WBRNAi00060898 Inferred_automatically: RNAi_primary
      WBRNAi00033440 Inferred_automatically: RNAi_primary
      WBRNAi00060897 Inferred_automatically: RNAi_primary
      WBRNAi00094994 Inferred_automatically: RNAi_primary
      WBRNAi00060899 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3612
      Expr1018748
      Expr1033792
      Expr1148339
      Expr2002454
      Expr2020670
    Drives_construct: WBCnstr00015935
    Construct_product: WBCnstr00011537
    Microarray_results (18)
    Expression_cluster (296)
    Interaction (50)
  Map_info: Positive: Positive_clone: F11E6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 17.1265
  Reference: WBPaper00038491
    WBPaper00059997
    WBPaper00064676
    WBPaper00064942
    WBPaper00065331
  Method: Gene