WormBase Tree Display for Gene: WBGene00008672

WBGene00008672 SMap: S_parent: Sequence: F11A5
  Identity: Version: 2
    Name: CGC_name: rabr-3 Person_evidence: WBPerson1705
          Laboratory_evidence: EB
      Sequence_name: F11A5.4
      Molecular_name: F11A5.4
        F11A5.4.1
        CE15782
      Other_name: F11A5.4
        CELE_F11A5.4 Accession_evidence: NDB BX284605
      Public_name: rabr-3
    DB_info: Database: AceView gene 5Q675
        WormQTL gene WBGene00008672
        WormFlux gene WBGene00008672
        NDB locus_tag CELE_F11A5.4
        Panther gene CAEEL|WormBase=WBGene00008672|UniProtKB=O17789
          family PTHR47979
        NCBI gene 184331
        RefSeq protein NM_074683.3
        TREEFAM TREEFAM_ID TF352278
        TrEMBL UniProtAcc O17789
        UniProt_GCRP UniProtAcc O17789
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 29 Sep 2022 22:37:18 WBPerson21950 Name_change: CGC_name: rabr-3
                Other_name: F11A5.4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rabr
    Allele (38)
    Strain: WBStrain00032240
      WBStrain00036523
    RNASeq_FPKM (74)
    GO_annotation: 00030688
      00030689
      00030690
      00030691
      00030692
      00030693
      00030694
      00116549
      00116550
    Contained_in_operon: CEOP5523
    Ortholog: WBGene00224578 Brugia malayi From_analysis: WormBase-Compara
      chrV_pilon.g17073 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00209466 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00237917 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00113195 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00261323 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294642 Trichuris muris From_analysis: WormBase-Compara
    Paralog (32)
    Structured_description: Automated_description: Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in vesicle-mediated transport. Predicted to be located in Golgi membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F11A5.4
    Corresponding_transcript: F11A5.4.1
  Experimental_info: RNAi_result: WBRNAi00044352 Inferred_automatically: RNAi_primary
      WBRNAi00030809 Inferred_automatically: RNAi_primary
      WBRNAi00013108 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011269
      Expr1148291
      Expr2002432
      Expr2020648
    Drives_construct: WBCnstr00032784
    Construct_product: WBCnstr00032784
    Microarray_results (18)
    Expression_cluster (45)
    SAGE_tag: SAGE:ctttctcctt Strand: Antisense
      SAGE:ccgataatat Strand: Antisense
      SAGE:tgttcaaata Strand: Sense
        Unambiguously_mapped
    Interaction: WBInteraction000144679
      WBInteraction000176014
      WBInteraction000253119
      WBInteraction000271928
      WBInteraction000278928
      WBInteraction000287219
      WBInteraction000289185
      WBInteraction000410789
      WBInteraction000427871
      WBInteraction000435522
  Map_info: Map: V Position: 9.83663
    Positive: Positive_clone: F11A5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene