WormBase Tree Display for Gene: WBGene00008656
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WBGene00008656 | SMap | S_parent | Sequence | F10F2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | lron-5 | Person_evidence | WBPerson637 | |||||
Sequence_name | F10F2.4 | ||||||||
Molecular_name | F10F2.4 | ||||||||
F10F2.4.1 | |||||||||
CE31471 | |||||||||
Other_name | CELE_F10F2.4 | Accession_evidence | NDB | BX284603 | |||||
Public_name | lron-5 | ||||||||
DB_info | Database | AceView | gene | 3F717 | |||||
WormQTL | gene | WBGene00008656 | |||||||
WormFlux | gene | WBGene00008656 | |||||||
NDB | locus_tag | CELE_F10F2.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008656|UniProtKB=Q19312 | |||||||
family | PTHR45617 | ||||||||
NCBI | gene | 184307 | |||||||
RefSeq | protein | NM_065542.6 | |||||||
TrEMBL | UniProtAcc | Q19312 | |||||||
UniProt_GCRP | UniProtAcc | Q19312 | |||||||
OMIM | gene | 603288 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 09 Dec 2011 15:47:23 | WBPerson2970 | Name_change | CGC_name | lron-5 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lron | ||||||||
Allele (38) | |||||||||
Strain | WBStrain00047624 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00064333 | ||||||||
Ortholog (34) | |||||||||
Paralog (12) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Expressed in nerve ring; tail; and ventral nerve cord. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); corneal disease (multiple); and periodontal disease (multiple). Is an ortholog of several human genes including FMOD (fibromodulin); LUM (lumican); and OMD (osteomodulin). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:3407 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6724) | ||||
DOID:11342 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6309) | ||||||
DOID:0060287 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6309) | ||||||
DOID:3087 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3774) | ||||||
DOID:799 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6724) | ||||||
DOID:10126 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6309) | ||||||
DOID:1793 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6724) | ||||||
DOID:3393 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6724) | ||||||
DOID:2566 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6309) | ||||||
DOID:824 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3774) | ||||||
Molecular_info | Corresponding_CDS | F10F2.4 | |||||||
Corresponding_CDS_history | F10F2.4:wp82 | ||||||||
Corresponding_transcript | F10F2.4.1 | ||||||||
Other_sequence | HCC07413_1 | ||||||||
Dviv_isotig30850 | |||||||||
HC05615 | |||||||||
Oden_isotig24064 | |||||||||
Associated_feature | WBsf645108 | ||||||||
WBsf224767 | |||||||||
Experimental_info | RNAi_result | WBRNAi00001003 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00067524 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044290 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013073 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005106 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044289 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030783 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram928 | ||||||||
Expr100 | |||||||||
Expr5725 | |||||||||
Expr9906 | |||||||||
Expr1023550 | |||||||||
Expr1033769 | |||||||||
Expr1148237 | |||||||||
Expr2013278 | |||||||||
Expr2031509 | |||||||||
Drives_construct | WBCnstr00002901 | ||||||||
WBCnstr00014392 | |||||||||
WBCnstr00032794 | |||||||||
Construct_product | WBCnstr00014392 | ||||||||
WBCnstr00032794 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (154) | |||||||||
Interaction | WBInteraction000006978 | ||||||||
WBInteraction000140266 | |||||||||
WBInteraction000396162 | |||||||||
WBInteraction000547733 | |||||||||
Map_info | Map | III | Position | -2.9722 | |||||
Positive | Positive_clone | F10F2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00060223 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |