WormBase Tree Display for Gene: WBGene00008632
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| WBGene00008632 | SMap | S_parent | Sequence | F10A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-88 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F10A3.2 | ||||||||
| Molecular_name | F10A3.2 | ||||||||
| F10A3.2.1 | |||||||||
| CE35458 | |||||||||
| Other_name | CELE_F10A3.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-88 | ||||||||
| DB_info | Database | AceView | gene | 5Q622 | |||||
| WormQTL | gene | WBGene00008632 | |||||||
| WormFlux | gene | WBGene00008632 | |||||||
| NDB | locus_tag | CELE_F10A3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008632|UniProtKB=O45335 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 184273 | |||||||
| RefSeq | protein | NM_074664.5 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | O45335 | |||||||
| UniProt_GCRP | UniProtAcc | O45335 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-88 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele | WBVar02034604 | ||||||||
| WBVar00272874 | |||||||||
| WBVar02122682 | |||||||||
| WBVar00480617 | |||||||||
| WBVar00480618 | |||||||||
| WBVar00480619 | |||||||||
| WBVar00480620 | |||||||||
| WBVar00480621 | |||||||||
| WBVar00480622 | |||||||||
| WBVar00031355 | |||||||||
| WBVar00031360 | |||||||||
| WBVar00031365 | |||||||||
| WBVar00031370 | |||||||||
| WBVar02107616 | |||||||||
| WBVar00031375 | |||||||||
| WBVar01498519 | |||||||||
| WBVar01632989 | |||||||||
| WBVar01078369 | |||||||||
| WBVar00603054 | |||||||||
| WBVar01078370 | |||||||||
| WBVar01078371 | |||||||||
| WBVar01078372 | |||||||||
| WBVar01078373 | |||||||||
| WBVar01078374 | |||||||||
| WBVar02123300 | |||||||||
| WBVar01078375 | |||||||||
| WBVar01078376 | |||||||||
| WBVar01777583 | |||||||||
| WBVar01777584 | |||||||||
| WBVar01777585 | |||||||||
| WBVar02121288 | |||||||||
| WBVar01498548 | |||||||||
| WBVar01777586 | |||||||||
| WBVar01777587 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar02124056 | |||||||||
| WBVar02123138 | |||||||||
| WBVar02123139 | |||||||||
| WBVar01499299 | |||||||||
| WBVar02123704 | |||||||||
| WBVar02124626 | |||||||||
| WBVar02124261 | |||||||||
| WBVar02124262 | |||||||||
| WBVar02124830 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (40) | |||||||||
| Paralog (226) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Is affected by several genes including daf-2; glp-1; and age-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including Heme; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F10A3.2 | |||||||
| Corresponding_CDS_history | F10A3.2:wp109 | ||||||||
| Corresponding_transcript | F10A3.2.1 | ||||||||
| Associated_feature | WBsf1002404 | ||||||||
| WBsf235121 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044200 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103257 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030740 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013027 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028096 | ||||||||
| Expr1148158 | |||||||||
| Expr2011584 | |||||||||
| Drives_construct | WBCnstr00032814 | ||||||||
| Construct_product | WBCnstr00032814 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction | WBInteraction000318812 | ||||||||
| WBInteraction000320824 | |||||||||
| WBInteraction000521337 | |||||||||
| WBInteraction000547725 | |||||||||
| Map_info | Map | V | Position | 9.79643 | Error | 0.002513 | |||
| Positive | Positive_clone | F10A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
