WormBase Tree Display for Gene: WBGene00008630
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| WBGene00008630 | SMap | S_parent | Sequence | F09F3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-175 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F09F3.10 | ||||||||
| Molecular_name | F09F3.10 | ||||||||
| F09F3.10.1 | |||||||||
| CE46427 | |||||||||
| Other_name | CELE_F09F3.10 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-175 | ||||||||
| DB_info | Database | AceView | gene | 5O347 | |||||
| WormQTL | gene | WBGene00008630 | |||||||
| WormFlux | gene | WBGene00008630 | |||||||
| NDB | locus_tag | CELE_F09F3.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008630|UniProtKB=P90822 | |||||||
| family | PTHR46587 | ||||||||
| NCBI | gene | 184255 | |||||||
| RefSeq | protein | NM_074037.3 | |||||||
| TREEFAM | TREEFAM_ID | TF317146 | |||||||
| TrEMBL | UniProtAcc | P90822 | |||||||
| UniProt_GCRP | UniProtAcc | P90822 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-175 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (25) | |||||||||
| Strain | WBStrain00036694 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00049141 | ||||||||
| 00049142 | |||||||||
| 00049143 | |||||||||
| 00116510 | |||||||||
| 00116511 | |||||||||
| 00116512 | |||||||||
| 00116513 | |||||||||
| Ortholog (16) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F09F3.10 | |||||||
| Corresponding_CDS_history | F09F3.10:wp227 | ||||||||
| Corresponding_transcript | F09F3.10.1 | ||||||||
| Associated_feature | WBsf978746 | ||||||||
| WBsf1001901 | |||||||||
| Transcription_factor | WBTranscriptionFactor000814 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00044141 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012989 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021389 | ||||||||
| Expr1148110 | |||||||||
| Expr2014076 | |||||||||
| Expr2032316 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (29) | |||||||||
| Interaction | WBInteraction000249369 | ||||||||
| WBInteraction000395841 | |||||||||
| WBInteraction000399122 | |||||||||
| WBInteraction000413996 | |||||||||
| WBInteraction000417454 | |||||||||
| WBInteraction000436206 | |||||||||
| WBInteraction000449971 | |||||||||
| WBInteraction000526957 | |||||||||
| Map_info | Map | V | Position | 5.69937 | Error | 0.001032 | |||
| Positive | Positive_clone | F09F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00062625 | ||||||||
| WBPaper00064898 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
