WormBase Tree Display for Gene: WBGene00008565
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| WBGene00008565 | SMap | S_parent | Sequence | F08A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | acox-1.2 | Person_evidence | WBPerson6498 | |||||
| Sequence_name | F08A8.2 | ||||||||
| Molecular_name | F08A8.2 | ||||||||
| F08A8.2.1 | |||||||||
| CE43421 | |||||||||
| Other_name | drd-100 | Paper_evidence | WBPaper00044557 | ||||||
| Person_evidence | WBPerson10050 | ||||||||
| acox-2 | Person_evidence | WBPerson6498 | |||||||
| CELE_F08A8.2 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | acox-1.2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Feb 2015 13:16:53 | WBPerson2970 | Name_change | CGC_name | acox-2 | ||||
| 3 | 29 Apr 2015 12:07:40 | WBPerson2970 | Name_change | Other_name | drd-100 | ||||
| 4 | 05 Jan 2017 11:44:00 | WBPerson2970 | Name_change | CGC_name | acox-1.2 | ||||
| Other_name | acox-2 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acox | ||||||||
| Allele (92) | |||||||||
| Component_of_genotype | WBGenotype00000156 | ||||||||
| WBGenotype00000157 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (30) | |||||||||
| Ortholog (59) | |||||||||
| Paralog (22) | |||||||||
| Structured_description | Automated_description | Enables ATP binding activity and acyl-CoA oxidase activity. Involved in ascaroside biosynthetic process and fatty acid beta-oxidation using acyl-CoA oxidase. Predicted to be located in peroxisome. Human ortholog(s) of this gene implicated in congenital bile acid synthesis defect 6 and peroxisomal acyl-CoA oxidase deficiency. Is an ortholog of human ACOX1 (acyl-CoA oxidase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111067 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:120) | ||||
| DOID:0070516 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:119) | ||||||
| DOID:0050797 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:119) | ||||||
| Molecular_info | Corresponding_CDS | F08A8.2 | |||||||
| Corresponding_CDS_history | F08A8.2:wp198 | ||||||||
| Corresponding_transcript | F08A8.2.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf643784 | ||||||||
| WBsf985734 | |||||||||
| WBsf218660 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003336 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043951 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089521 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102612 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092599 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081471 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089523 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089522 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081473 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089524 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram2033 | ||||||||
| Expr5676 | |||||||||
| Expr1013610 | |||||||||
| Expr1147925 | |||||||||
| Expr2009167 | |||||||||
| Expr2027404 | |||||||||
| Drives_construct | WBCnstr00003633 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (306) | |||||||||
| Interaction | WBInteraction000046043 | ||||||||
| WBInteraction000046044 | |||||||||
| WBInteraction000047677 | |||||||||
| WBInteraction000047687 | |||||||||
| WBInteraction000047688 | |||||||||
| WBInteraction000113171 | |||||||||
| WBInteraction000185080 | |||||||||
| WBInteraction000192036 | |||||||||
| WBInteraction000199900 | |||||||||
| WBInteraction000220444 | |||||||||
| WBInteraction000227061 | |||||||||
| WBInteraction000229526 | |||||||||
| WBInteraction000233791 | |||||||||
| WBInteraction000253293 | |||||||||
| WBInteraction000257804 | |||||||||
| WBInteraction000268449 | |||||||||
| WBInteraction000277278 | |||||||||
| WBInteraction000280241 | |||||||||
| WBInteraction000303034 | |||||||||
| WBInteraction000304682 | |||||||||
| WBInteraction000316630 | |||||||||
| WBInteraction000318056 | |||||||||
| WBInteraction000335427 | |||||||||
| WBInteraction000335610 | |||||||||
| WBInteraction000341009 | |||||||||
| WBInteraction000342470 | |||||||||
| WBInteraction000347264 | |||||||||
| WBInteraction000352106 | |||||||||
| WBInteraction000368773 | |||||||||
| WBInteraction000374727 | |||||||||
| WBInteraction000376512 | |||||||||
| WBInteraction000395492 | |||||||||
| WBInteraction000395768 | |||||||||
| WBInteraction000399575 | |||||||||
| WBInteraction000402832 | |||||||||
| WBInteraction000413601 | |||||||||
| WBInteraction000416118 | |||||||||
| WBInteraction000417520 | |||||||||
| WBInteraction000425746 | |||||||||
| WBInteraction000426793 | |||||||||
| WBInteraction000429925 | |||||||||
| WBInteraction000444470 | |||||||||
| WBInteraction000446067 | |||||||||
| WBInteraction000465357 | |||||||||
| WBInteraction000540815 | |||||||||
| WBInteraction000550421 | |||||||||
| WBInteraction000550423 | |||||||||
| WBInteraction000551736 | |||||||||
| WBInteraction000556742 | |||||||||
| WBInteraction000556744 | |||||||||
| WBInteraction000570918 | |||||||||
| WBInteraction000571178 | |||||||||
| WBInteraction000579409 | |||||||||
| WBInteraction000583204 | |||||||||
| WBInteraction000586421 | |||||||||
| Map_info | Map | I | Position | 15.1495 | |||||
| Positive | Positive_clone | F08A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (19) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
