WormBase Tree Display for Gene: WBGene00008560
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| WBGene00008560 | SMap | S_parent | Sequence | F07H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pho-13 | Person_evidence | WBPerson411 | |||||
| WBPerson261 | |||||||||
| Sequence_name | F07H5.9 | ||||||||
| Molecular_name | F07H5.9a | ||||||||
| F07H5.9a.1 | |||||||||
| CE35850 | |||||||||
| F07H5.9b | |||||||||
| Other_name | CELE_F07H5.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | pho-13 | ||||||||
| DB_info | Database | AceView | gene | 2J94 | |||||
| WormQTL | gene | WBGene00008560 | |||||||
| WormFlux | gene | WBGene00008560 | |||||||
| NDB | locus_tag | CELE_F07H5.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008560|UniProtKB=Q19175 | |||||||
| family | PTHR11567 | ||||||||
| NCBI | gene | 184165 | |||||||
| RefSeq | protein | NM_063474.6 | |||||||
| NR_023949.1 | |||||||||
| TrEMBL | UniProtAcc | Q19175 | |||||||
| UniProt_GCRP | UniProtAcc | Q19175 | |||||||
| RNAcentral | URSid | URS00004425DA | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Nov 2008 10:21:23 | WBPerson2970 | Name_change | CGC_name | pho-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pho | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01784260 | |||||||||
| WBVar02150121 | |||||||||
| WBVar01498435 | |||||||||
| WBVar01499917 | |||||||||
| WBVar00226455 | |||||||||
| WBVar00226456 | |||||||||
| WBVar01696005 | |||||||||
| WBVar00752413 | |||||||||
| WBVar01499423 | |||||||||
| WBVar00752414 | |||||||||
| WBVar00752415 | |||||||||
| WBVar00752416 | |||||||||
| WBVar00752417 | |||||||||
| WBVar00752418 | |||||||||
| WBVar00752419 | |||||||||
| WBVar00752420 | |||||||||
| WBVar00752421 | |||||||||
| WBVar00752422 | |||||||||
| WBVar00752423 | |||||||||
| WBVar00752424 | |||||||||
| WBVar00752425 | |||||||||
| WBVar00752426 | |||||||||
| WBVar00372831 | |||||||||
| WBVar00372832 | |||||||||
| WBVar00372833 | |||||||||
| WBVar00372834 | |||||||||
| WBVar00372835 | |||||||||
| WBVar01720399 | |||||||||
| WBVar00174179 | |||||||||
| WBVar00174180 | |||||||||
| WBVar01498940 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00063740 | ||||||||
| 00063741 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Automated_description | Predicted to enable phosphatase activity. Predicted to be involved in dephosphorylation. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F07H5.9a | |||||||
| Corresponding_CDS_history | F07H5.9:wp111 | ||||||||
| Corresponding_transcript | F07H5.9b | ||||||||
| F07H5.9a.1 | |||||||||
| Other_sequence | Oden_isotig10913 | ||||||||
| HC03212 | |||||||||
| Oden_isotig20785 | |||||||||
| Oden_isotig10914 | |||||||||
| CBC06222_1 | |||||||||
| Name_isotig00964 | |||||||||
| ACC02538_1 | |||||||||
| Oden_isotig10915 | |||||||||
| Associated_feature | WBsf650368 | ||||||||
| WBsf223548 | |||||||||
| WBsf223549 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030624 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043948 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012861 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028408 | ||||||||
| Expr1033729 | |||||||||
| Expr1147920 | |||||||||
| Expr2014904 | |||||||||
| Expr2033140 | |||||||||
| Drives_construct | WBCnstr00032871 | ||||||||
| Construct_product | WBCnstr00032871 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (258) | |||||||||
| Interaction | WBInteraction000370784 | ||||||||
| WBInteraction000396394 | |||||||||
| WBInteraction000412075 | |||||||||
| WBInteraction000442880 | |||||||||
| WBInteraction000447317 | |||||||||
| WBInteraction000448771 | |||||||||
| Map_info | Map | II | Position | 0.899849 | Error | 0.000692 | |||
| Positive | Positive_clone | F07H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
