WormBase Tree Display for Gene: WBGene00008559
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WBGene00008559 | SMap | S_parent | Sequence | F07H5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | appg-2 | Person_evidence | WBPerson1820 | |||||
Sequence_name | F07H5.8 | ||||||||
Molecular_name | F07H5.8 | ||||||||
F07H5.8.1 | |||||||||
CE47973 | |||||||||
Other_name | CELE_F07H5.8 | Accession_evidence | NDB | BX284602 | |||||
Public_name | appg-2 | ||||||||
DB_info | Database | AceView | gene | 2J93 | |||||
WormQTL | gene | WBGene00008559 | |||||||
WormFlux | gene | WBGene00008559 | |||||||
NDB | locus_tag | CELE_F07H5.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008559|UniProtKB=Q19182 | |||||||
family | PTHR31895 | ||||||||
NCBI | gene | 174407 | |||||||
RefSeq | protein | NM_063473.7 | |||||||
TREEFAM | TREEFAM_ID | TF316329 | |||||||
TrEMBL | UniProtAcc | Q19182 | |||||||
UniProt_GCRP | UniProtAcc | Q19182 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | appg-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | appg | ||||||||
Allele (45) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (35) | |||||||||
Paralog (26) | |||||||||
Structured_description | Automated_description | Enriched in ABplppppaa; ABprppppaa; head mesodermal cell; neurons; and somatic gonad precursor based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; and RNA-seq studies. Is affected by twenty chemicals including methylmercury hydroxide; rotenone; and sodium arsenite based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Cysteine rich repeat, tripleX and Cysteine rich repeat. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F07H5.8 | |||||||
Corresponding_CDS_history | F07H5.8:wp175 | ||||||||
F07H5.8:wp234 | |||||||||
Corresponding_transcript | F07H5.8.1 | ||||||||
Other_sequence | Name_isotig06035 | ||||||||
Associated_feature | WBsf644506 | ||||||||
WBsf988825 | |||||||||
WBsf988826 | |||||||||
WBsf988827 | |||||||||
WBsf1012749 | |||||||||
WBsf221814 | |||||||||
WBsf221815 | |||||||||
Experimental_info | RNAi_result | WBRNAi00043947 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012853 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030623 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012860 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1017146 | ||||||||
Expr1033728 | |||||||||
Expr1147919 | |||||||||
Expr2002275 | |||||||||
Expr2020494 | |||||||||
Drives_construct | WBCnstr00032872 | ||||||||
Construct_product | WBCnstr00032872 | ||||||||
Microarray_results (26) | |||||||||
Expression_cluster (173) | |||||||||
Interaction (150) | |||||||||
Map_info | Positive | Positive_clone | F07H5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 0.899637 | |||||||
Reference | WBPaper00026929 | ||||||||
WBPaper00064648 | |||||||||
Method | Gene |