WormBase Tree Display for Gene: WBGene00008493
expand all nodes | collapse all nodes | view schema
WBGene00008493 | SMap | S_parent | Sequence | F01D5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F01D5.2 | |||||||
Molecular_name | F01D5.2 | ||||||||
F01D5.2.1 | |||||||||
CE18560 | |||||||||
Other_name | CELE_F01D5.2 | Accession_evidence | NDB | BX284602 | |||||
Public_name | F01D5.2 | ||||||||
DB_info | Database | AceView | gene | 2O288 | |||||
WormQTL | gene | WBGene00008493 | |||||||
WormFlux | gene | WBGene00008493 | |||||||
NDB | locus_tag | CELE_F01D5.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008493|UniProtKB=Q9XVB0 | |||||||
family | PTHR21724 | ||||||||
NCBI | gene | 184056 | |||||||
RefSeq | protein | NM_064532.2 | |||||||
TREEFAM | TREEFAM_ID | TF318899 | |||||||
TrEMBL | UniProtAcc | Q9XVB0 | |||||||
UniProt_GCRP | UniProtAcc | Q9XVB0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (13) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00124497 | Caenorhabditis japonica | From_analysis | OMA | |||||
TreeFam | |||||||||
WBGene00039732 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00146112 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
CSP40.g5614 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cni-F01D5.3 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold630.g19489 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00020.g1208 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g6465 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00092346 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Paralog (60) | |||||||||
Structured_description | Automated_description | Enriched in intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty chemicals including rotenone; Tunicamycin; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like and ShKT domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (3) | |||||||||
Experimental_info (7) | |||||||||
Map_info | Positive | Positive_clone | F01D5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 22.0376 | |||||||
Method | Gene |