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WormBase Tree Display for Gene: WBGene00008486

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Name Class

WBGene00008486SMapS_parentSequenceF01D4
IdentityVersion2
Name (5)
DB_infoDatabaseAceViewgene4L235
WormQTLgeneWBGene00008486
WormFluxgeneWBGene00008486
NDBlocus_tagCELE_F01D4.2
PanthergeneCAEEL|WormBase=WBGene00008486|UniProtKB=O17757
familyPTHR48043
NCBIgene177939
RefSeqproteinNM_069532.5
TREEFAMTREEFAM_IDTF352368
TrEMBLUniProtAccO17757
UniProt_GCRPUniProtAccO17757
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
210 Jun 2005 11:17:00WBPerson2970Name_changeCGC_nameugt-44
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classugt
Allele (23)
RNASeq_FPKM (74)
GO_annotation00030644
00030645
00030646
00030647
00030648
00030649
00030650
00116385
OrthologWBGene00059209Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00073461Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00030189Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00146891Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00126002Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CSP26.g17170Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21732Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7421Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5355Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g809Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g19922Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g15070Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00098.g4264Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g15071Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g15072Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17778Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00358.g10061Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_014973Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_40077100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g11603Caenorhabditis elegansFrom_analysisWormBase-Compara
FB:FBgn0032684Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
PhylomeDB
SonicParanoid
FB:FBgn0027074Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
PhylomeDB
SonicParanoid
FB:FBgn0032713Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
PhylomeDB
SonicParanoid
FB:FBgn0027070Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
PhylomeDB
SonicParanoid
FB:FBgn0027073Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
PhylomeDB
SonicParanoid
FB:FBgn0034605Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
PhylomeDB
SonicParanoid
FB:FBgn0040091Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
SonicParanoid
FB:FBgn0039085Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
PhylomeDB
SonicParanoid
FB:FBgn0039087Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
SonicParanoid
FB:FBgn0015663Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
PhylomeDB
SonicParanoid
FB:FBgn0040250Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
SonicParanoid
FB:FBgn0040252Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
SonicParanoid
FB:FBgn0040256Drosophila melanogasterFrom_analysisHieranoid
OMA
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040426-2762Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
ZFIN:ZDB-GENE-080227-6Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
ZFIN:ZDB-GENE-091118-36Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
HGNC:26625Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
PhylomeDB
SonicParanoid
MGI:1919023Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
MGI:1919344Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
MGI:2149905Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
MGI:2140794Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
MGI:2140962Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
RGD:69432Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
RGD:708541Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
RGD:1308444Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
RGD:1559459Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
PhylomeDB
Paralog (74)
Structured_descriptionAutomated_descriptionPredicted to enable UDP-glycosyltransferase activity. Involved in innate immune response. Predicted to be located in membrane. Is an ortholog of human UGT3A1 (UDP glycosyltransferase family 3 member A1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF01D4.2
Corresponding_transcriptF01D4.2.1
Other_sequence (16)
Associated_featureWBsf228994
Experimental_infoRNAi_resultWBRNAi00012716Inferred_automaticallyRNAi_primary
WBRNAi00030520Inferred_automaticallyRNAi_primary
WBRNAi00094859Inferred_automaticallyRNAi_primary
WBRNAi00043718Inferred_automaticallyRNAi_primary
Expr_patternExpr1015510
Expr1033693
Expr1147704
Expr2017790
Expr2035927
Drives_constructWBCnstr00032932
Construct_productWBCnstr00032932
Microarray_results (19)
Expression_cluster (298)
Interaction (50)
Map_infoMapIVPosition4.60029Error0.000461
PositivePositive_cloneF01D4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028789
WBPaper00038491
WBPaper00055090
WBPaper00055433
WBPaper00061938
WBPaper00062289
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene