WormBase Tree Display for Gene: WBGene00008485
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| WBGene00008485 | SMap | S_parent | Sequence | F01D4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | ugt-43 | Person_evidence | WBPerson1208 | |||||
| WBPerson655 | |||||||||
| Sequence_name | F01D4.1 | ||||||||
| Molecular_name | F01D4.1a | ||||||||
| F01D4.1a.1 | |||||||||
| CE38497 | |||||||||
| F01D4.1b | |||||||||
| CE09153 | |||||||||
| F01D4.1b.1 | |||||||||
| Other_name | CELE_F01D4.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ugt-43 | ||||||||
| DB_info | Database | AceView | gene | 4L231 | |||||
| WormQTL | gene | WBGene00008485 | |||||||
| WormFlux | gene | WBGene00008485 | |||||||
| NDB | locus_tag | CELE_F01D4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008485|UniProtKB=D5MCT5 | |||||||
| family | PTHR48043 | ||||||||
| NCBI | gene | 184052 | |||||||
| RefSeq | protein | NM_001268559.3 | |||||||
| NM_001268558.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF352368 | |||||||
| TrEMBL | UniProtAcc | O17756 | |||||||
| D5MCT5 | |||||||||
| UniProt_GCRP | UniProtAcc | D5MCT5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jun 2005 11:17:00 | WBPerson2970 | Name_change | CGC_name | ugt-43 | ||||
| 3 | 17 Mar 2010 11:14:08 | WBPerson1983 | Event | Acquires_merge | WBGene00045186 | ||||
| Acquires_merge | WBGene00045186 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ugt | ||||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007665 | ||||||||
| 00007666 | |||||||||
| 00007667 | |||||||||
| 00007668 | |||||||||
| 00007669 | |||||||||
| 00007670 | |||||||||
| 00116384 | |||||||||
| Ortholog (35) | |||||||||
| Paralog (74) | |||||||||
| Structured_description | Automated_description | Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of human UGT3A1 (UDP glycosyltransferase family 3 member A1) and UGT3A2 (UDP glycosyltransferase family 3 member A2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F01D4.1a | |||||||
| F01D4.1b | |||||||||
| Corresponding_CDS_history | F01D4.1:wp142 | ||||||||
| Corresponding_transcript | F01D4.1a.1 | ||||||||
| F01D4.1b.1 | |||||||||
| Other_sequence | Acan_isotig11677 | ||||||||
| Associated_feature | WBsf646306 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012715 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043717 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097106 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021101 | ||||||||
| Expr1147703 | |||||||||
| Expr2017789 | |||||||||
| Expr2035926 | |||||||||
| Drives_construct | WBCnstr00032933 | ||||||||
| Construct_product | WBCnstr00032933 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (225) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Map | IV | Position | 4.59917 | Error | 0.000544 | |||
| Positive | Positive_clone | F01D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055433 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
