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WormBase Tree Display for Gene: WBGene00008480

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Name Class

WBGene00008480SMapS_parentSequenceE04D5
IdentityVersion2
NameCGC_nameeif-2APerson_evidenceWBPerson2266
Sequence_nameE04D5.1
Molecular_nameE04D5.1a
E04D5.1a.1
CE37820
E04D5.1b
CE37821
E04D5.1b.1
Other_nameeIF2alphaPaper_evidenceWBPaper00048445
CELE_E04D5.1Accession_evidenceNDBBX284602
Public_nameeif-2A
DB_infoDatabaseAceViewgene2K709
WormQTLgeneWBGene00008480
WormFluxgeneWBGene00008480
NDBlocus_tagCELE_E04D5.1
PanthergeneCAEEL|WormBase=WBGene00008480|UniProtKB=Q19052
familyPTHR13227
NCBIgene174606
RefSeqproteinNM_001393177.1
NM_063838.8
SwissProtUniProtAccQ19052
TREEFAMTREEFAM_IDTF105866
UniProt_GCRPUniProtAccQ19052
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
209 Jan 2017 15:00:31WBPerson2970Name_changeCGC_nameeif-2A
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classeif
Allele (39)
StrainWBStrain00002975
RNASeq_FPKM (74)
GO_annotation (15)
OrthologWBGene00026039Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00053368Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00149926Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00118273Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00128264Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00131504Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00269370Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g6155Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3999Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10488Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11263Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13317Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27079Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13217Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9778Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g25692Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g16066Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00414.g10524Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01352.g16290Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-E04D5.1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold458.g1390Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00141.g5458Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09375Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005539Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01822Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15455Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20285600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5724Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238645Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00258428Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290998Trichuris murisFrom_analysisWormBase-Compara
SGD:S000003286Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0037135Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-050626-52Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:3254Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1098684Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1589591Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00044632Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
Structured_descriptionAutomated_descriptionPredicted to enable nucleic acid binding activity and ribosome binding activity. Involved in positive regulation of gene expression. Predicted to be part of cytosolic small ribosomal subunit. Is an ortholog of human EIF2A (eukaryotic translation initiation factor 2A).Paper_evidenceWBPaper00065943
Curator_confirmed (2)
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSE04D5.1a
E04D5.1b
Corresponding_CDS_historyE04D5.1a:wp136
E04D5.1b:wp136
Corresponding_transcriptE04D5.1a.1
E04D5.1b.1
Other_sequence (47)
Associated_featureWBsf644609
WBsf981263
WBsf222009
WBsf222010
Experimental_infoRNAi_resultWBRNAi00043669Inferred_automaticallyRNAi_primary
WBRNAi00012683Inferred_automaticallyRNAi_primary
WBRNAi00007759Inferred_automaticallyRNAi_primary
Expr_patternChronogram1259
Expr5648
Expr1025143
Expr1033689
Expr1147653
Expr2011242
Expr2029478
Drives_constructWBCnstr00003480
WBCnstr00032938
Construct_productWBCnstr00032938
Microarray_results (30)
Expression_cluster (142)
Interaction (72)
Map_infoPositivePositive_cloneE04D5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII2.5649
ReferenceWBPaper00035925
WBPaper00038491
WBPaper00048445
WBPaper00055090
WBPaper00055602
WBPaper00059485
MethodGene