WormBase Tree Display for Gene: WBGene00008480
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| WBGene00008480 | SMap | S_parent | Sequence | E04D5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eif-2A | Person_evidence | WBPerson2266 | |||||
| Sequence_name | E04D5.1 | ||||||||
| Molecular_name | E04D5.1a | ||||||||
| E04D5.1a.1 | |||||||||
| CE37820 | |||||||||
| E04D5.1b | |||||||||
| CE37821 | |||||||||
| E04D5.1b.1 | |||||||||
| Other_name | eIF2alpha | Paper_evidence | WBPaper00048445 | ||||||
| CELE_E04D5.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | eif-2A | ||||||||
| DB_info | Database | AceView | gene | 2K709 | |||||
| WormQTL | gene | WBGene00008480 | |||||||
| WormFlux | gene | WBGene00008480 | |||||||
| NDB | locus_tag | CELE_E04D5.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008480|UniProtKB=Q19052 | |||||||
| family | PTHR13227 | ||||||||
| NCBI | gene | 174606 | |||||||
| RefSeq | protein | NM_001393177.1 | |||||||
| NM_063838.8 | |||||||||
| SwissProt | UniProtAcc | Q19052 | |||||||
| TREEFAM | TREEFAM_ID | TF105866 | |||||||
| UniProt_GCRP | UniProtAcc | Q19052 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Jan 2017 15:00:31 | WBPerson2970 | Name_change | CGC_name | eif-2A | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eif | ||||||||
| Allele (39) | |||||||||
| Strain | WBStrain00002975 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00044632 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Automated_description | Predicted to enable nucleic acid binding activity and ribosome binding activity. Involved in positive regulation of gene expression. Predicted to be part of cytosolic small ribosomal subunit. Is an ortholog of human EIF2A (eukaryotic translation initiation factor 2A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS (2) | ||||||||
| Corresponding_CDS_history | E04D5.1a:wp136 | ||||||||
| E04D5.1b:wp136 | |||||||||
| Corresponding_transcript | E04D5.1a.1 | ||||||||
| E04D5.1b.1 | |||||||||
| Other_sequence | EX565706.1 | ||||||||
| CR04679 | |||||||||
| EY467497.1 | |||||||||
| ACC04146_1 | |||||||||
| EX553616.1 | |||||||||
| Acan_isotig07842 | |||||||||
| EY460673.1 | |||||||||
| HCC06736_1 | |||||||||
| Tcir_isotig06486 | |||||||||
| GP02050 | |||||||||
| FC543031.1 | |||||||||
| HBC02199_1 | |||||||||
| HC05262 | |||||||||
| PPC01139_1 | |||||||||
| FC546746.1 | |||||||||
| EY472549.1 | |||||||||
| Dviv_isotig16285 | |||||||||
| Hbac_isotig01752 | |||||||||
| ES743159.1 | |||||||||
| HGC07256_1 | |||||||||
| EY473841.1 | |||||||||
| OFC01277_1 | |||||||||
| EX567233.1 | |||||||||
| Tcol_isotig08649 | |||||||||
| GPC03082_1 | |||||||||
| HG03195 | |||||||||
| EY473378.1 | |||||||||
| FK809486.1 | |||||||||
| EY467871.1 | |||||||||
| CJC01598_1 | |||||||||
| ES410044.1 | |||||||||
| HBC02551_1 | |||||||||
| FC543263.1 | |||||||||
| CBC11989_1 | |||||||||
| FC539064.1 | |||||||||
| EX914909.1 | |||||||||
| FK807444.1 | |||||||||
| CJC00596_1 | |||||||||
| Hbac_isotig04713 | |||||||||
| Tcol_isotig08650 | |||||||||
| JI169271.1 | |||||||||
| Dviv_isotig16284 | |||||||||
| FM207790.1 | |||||||||
| PP00118 | |||||||||
| FC543732.1 | |||||||||
| DN152976.1 | |||||||||
| FC553031.1 | |||||||||
| Associated_feature | WBsf644609 | ||||||||
| WBsf981263 | |||||||||
| WBsf222009 | |||||||||
| WBsf222010 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043669 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012683 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007759 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1259 | ||||||||
| Expr5648 | |||||||||
| Expr1025143 | |||||||||
| Expr1033689 | |||||||||
| Expr1147653 | |||||||||
| Expr2011242 | |||||||||
| Expr2029478 | |||||||||
| Drives_construct | WBCnstr00003480 | ||||||||
| WBCnstr00032938 | |||||||||
| Construct_product | WBCnstr00032938 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (142) | |||||||||
| Interaction (72) | |||||||||
| Map_info | Positive | Positive_clone | E04D5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 2.5649 | |||||||
| Reference | WBPaper00035925 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048445 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055602 | |||||||||
| WBPaper00059485 | |||||||||
| Method | Gene |
