WormBase Tree Display for Gene: WBGene00008436
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| WBGene00008436 | SMap | S_parent | Sequence | DH11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | DH11.2 | |||||||
| Molecular_name | DH11.2 | ||||||||
| DH11.2.1 | |||||||||
| CE27900 | |||||||||
| Other_name | CELE_DH11.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | DH11.2 | ||||||||
| DB_info | Database | AceView | gene | 2I305 | |||||
| WormQTL | gene | WBGene00008436 | |||||||
| WormFlux | gene | WBGene00008436 | |||||||
| NDB | locus_tag | CELE_DH11.2 | |||||||
| NCBI | gene | 174283 | |||||||
| RefSeq | protein | NM_063275.8 | |||||||
| TrEMBL | UniProtAcc | Q19014 | |||||||
| UniProt_GCRP | UniProtAcc | Q19014 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (43) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00034133 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00053756 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00134587 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| CBOVI.g7627 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP21.g11775 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
| CSP26.g5425 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP28.g21217 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g20336 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP32.g6959 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP38.g12512 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP39.g2588 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| CSP40.g5004 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cang_2012_03_13_00140.g5427 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
| Cni-DH11.2 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold630.g18471 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00167.g6129 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| FL83_12784 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_005138 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| OTIPU.nOt.2.0.1.g08681 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
| Sp34_20149700 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrII_pilon.g5138 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00247024 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including RIS; body wall muscle cell from C lineage; body wall muscle cell from MS lineage; carbon dioxide sensory neurons; and head mesodermal cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-five chemicals including 1-methylnicotinamide; rotenone; and D-glucopyranose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | DH11.2 | |||||||
| Corresponding_CDS_history | DH11.2:wp52 | ||||||||
| Corresponding_transcript | DH11.2.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf644434 | ||||||||
| WBsf988631 | |||||||||
| WBsf988632 | |||||||||
| WBsf1012638 | |||||||||
| WBsf221669 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043544 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033541 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012619 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020531 | ||||||||
| Expr1033666 | |||||||||
| Expr1147537 | |||||||||
| Expr2002108 | |||||||||
| Expr2020333 | |||||||||
| Drives_construct | WBCnstr00032963 | ||||||||
| Construct_product | WBCnstr00032963 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (252) | |||||||||
| Interaction (52) | |||||||||
| Map_info | Positive | Positive_clone | DH11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.634954 | |||||||
| Method | Gene |
