WormBase Tree Display for Gene: WBGene00008393
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| WBGene00008393 | SMap | S_parent | Sequence | D1086 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | D1086.6 | |||||||
| Molecular_name | D1086.6 | ||||||||
| D1086.6.1 | |||||||||
| CE43106 | |||||||||
| Other_name | CELE_D1086.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | D1086.6 | ||||||||
| DB_info | Database | AceView | gene | 5O561 | |||||
| WormQTL | gene | WBGene00008393 | |||||||
| WormFlux | gene | WBGene00008393 | |||||||
| NDB | locus_tag | CELE_D1086.6 | |||||||
| NCBI | gene | 179904 | |||||||
| RefSeq | protein | NM_074091.9 | |||||||
| TREEFAM | TREEFAM_ID | TF351200 | |||||||
| TrEMBL | UniProtAcc | O17729 | |||||||
| UniProt_GCRP | UniProtAcc | O17729 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Jan 2005 16:03:27 | WBPerson1846 | Event | Split_into | WBGene00044080 | ||||
| Split_into | WBGene00044080 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01744323 | ||||||||
| WBVar02113980 | |||||||||
| WBVar01065190 | |||||||||
| WBVar01065191 | |||||||||
| WBVar01065192 | |||||||||
| WBVar01065193 | |||||||||
| WBVar01065194 | |||||||||
| WBVar01065195 | |||||||||
| WBVar01065196 | |||||||||
| WBVar00476174 | |||||||||
| WBVar00476175 | |||||||||
| WBVar00476176 | |||||||||
| WBVar00476177 | |||||||||
| WBVar00476178 | |||||||||
| WBVar00476179 | |||||||||
| WBVar00093899 | |||||||||
| WBVar01499621 | |||||||||
| WBVar02024585 | |||||||||
| WBVar01871406 | |||||||||
| WBVar01871407 | |||||||||
| WBVar00590803 | |||||||||
| WBVar00590804 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar01499299 | |||||||||
| WBVar01462766 | |||||||||
| WBVar02054843 | |||||||||
| WBVar01499316 | |||||||||
| WBVar01975380 | |||||||||
| WBVar01975381 | |||||||||
| WBVar01842717 | |||||||||
| Strain | WBStrain00032800 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrV_pilon.g16424 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00008394 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00008620 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00044080 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00044081 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in anterior spermatheca; cephalic sheath cell; dopaminergic neurons; hypodermis; and posterior spermatheca based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and rrf-3 based on RNA-seq and microarray studies. Is affected by sixteen chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1086.6 | |||||||
| Corresponding_CDS_history | D1086.6:wp48 | ||||||||
| D1086.6:wp138 | |||||||||
| D1086.6:wp195 | |||||||||
| Corresponding_transcript | D1086.6.1 | ||||||||
| Other_sequence | JI473971.1 | ||||||||
| DI01537 | |||||||||
| JI459561.1 | |||||||||
| Associated_feature | WBsf232862 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012554 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033600 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015665 | ||||||||
| Expr1147417 | |||||||||
| Expr2002058 | |||||||||
| Expr2020282 | |||||||||
| Drives_construct | WBCnstr00032999 | ||||||||
| Construct_product | WBCnstr00032999 | ||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (117) | |||||||||
| Map_info | Positive | Positive_clone | D1086 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.0906 | |||||||
| Method | Gene |
