WormBase Tree Display for Gene: WBGene00008390
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| WBGene00008390 | SMap | S_parent | Sequence | D1086 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | D1086.3 | |||||||
| Molecular_name | D1086.3 | ||||||||
| D1086.3.1 | |||||||||
| CE09061 | |||||||||
| Other_name | CELE_D1086.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | D1086.3 | ||||||||
| DB_info | Database | AceView | gene | 5O573 | |||||
| WormQTL | gene | WBGene00008390 | |||||||
| WormFlux | gene | WBGene00008390 | |||||||
| NDB | locus_tag | CELE_D1086.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008390|UniProtKB=O17725 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 179907 | |||||||
| RefSeq | protein | NM_001392647.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315851 | |||||||
| TrEMBL | UniProtAcc | O17725 | |||||||
| UniProt_GCRP | UniProtAcc | O17725 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (88) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalapppaa; ABarpapaaa; AVJ; cephalic sheath cell; and male distal tip cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by thirty-eight chemicals including Heme; methylmercuric chloride; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF19); Domain of unknown function DUF19; Uncharacterised protein family UPF0376; and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1086.3 | |||||||
| Corresponding_transcript | D1086.3.1 | ||||||||
| Other_sequence | CJC18326_1 | ||||||||
| CJC00744_1 | |||||||||
| Associated_feature | WBsf647511 | ||||||||
| WBsf1001927 | |||||||||
| WBsf232870 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030367 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002021 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043421 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012551 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011683 | ||||||||
| Expr1147414 | |||||||||
| Expr2002056 | |||||||||
| Expr2020280 | |||||||||
| Drives_construct | WBCnstr00033001 | ||||||||
| Construct_product | WBCnstr00033001 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (385) | |||||||||
| Interaction (32) | |||||||||
| Map_info | Positive | Positive_clone | D1086 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.09614 | |||||||
| Reference | WBPaper00057006 | ||||||||
| WBPaper00064229 | |||||||||
| Method | Gene |
