WormBase Tree Display for Gene: WBGene00008378

WBGene00008378 SMap: S_parent: Sequence: D1054
  Identity: Version: 2
    Name: CGC_name: ule-3 Person_evidence: WBPerson14772
            WBPerson1160
      Sequence_name: D1054.11
      Molecular_name: D1054.11
        D1054.11.1
        CE05529
      Other_name: CELE_D1054.11 Accession_evidence: NDB BX284605
      Public_name: ule-3
    DB_info: Database: AceView gene 5L275
        WormQTL gene WBGene00008378
        WormFlux gene WBGene00008378
        NDB locus_tag CELE_D1054.11
        Panther gene CAEEL|WormBase=WBGene00008378|UniProtKB=Q18947
          family PTHR38633
        NCBI gene 179497
        RefSeq protein NM_073358.7
        TREEFAM TREEFAM_ID TF352403
        TrEMBL UniProtAcc Q18947
        UniProt_GCRP UniProtAcc Q18947
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 28 Sep 2016 15:57:39 WBPerson2970 Name_change: CGC_name: ule-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ule
    Allele (21)
    RNASeq_FPKM (74)
    GO_annotation: 00062919
    Ortholog: WBGene00031248 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00068961 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00154249 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00127902 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP26.g10344 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5059 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18610 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10583 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5178 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g30081 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1543 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01294.g16186 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-D1054.11 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15567 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00594.g13290 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12210 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016501 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50300800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15606 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including MSpppaaa; cephalic sheath cell; germ line; head mesodermal cell; and spermatheca based on tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; proteomic; and tiling array studies. Is affected by nineteen chemicals including Ethanol; rotenone; and manganese chloride based on RNA-seq; proteomic; and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: D1054.11
    Corresponding_transcript: D1054.11.1
    Other_sequence: CRC01884_1
      CR00326
      CR09355
      CBC04256_1
      CJC12549_1
      CBC03444_1
    Associated_feature: WBsf232420
  Experimental_info: RNAi_result: WBRNAi00001077 Inferred_automatically: RNAi_primary
      WBRNAi00043386 Inferred_automatically: RNAi_primary
      WBRNAi00012530 Inferred_automatically: RNAi_primary
      WBRNAi00030342 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021419
      Expr1147373
      Expr2017823
      Expr2035960
    Drives_construct: WBCnstr00033013
    Construct_product: WBCnstr00021895
      WBCnstr00033013
    Microarray_results (19)
    Expression_cluster (231)
    Interaction (222)
  Map_info: Positive: Positive_clone: D1054 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 2.77835
  Reference: WBPaper00065388
  Method: Gene