WormBase Tree Display for Gene: WBGene00008366
expand all nodes | collapse all nodes | view schema
WBGene00008366 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tpra-1 | Person_evidence | WBPerson625 | |||
WBPerson567 | |||||||
WBPerson2812 | |||||||
Sequence_name | D1046.5 | ||||||
Molecular_name | D1046.5a | ||||||
D1046.5a.1 | |||||||
CE32845 | |||||||
D1046.5b | |||||||
CE44691 | |||||||
D1046.5b.1 | |||||||
Other_name | CELE_D1046.5 | Accession_evidence | NDB | BX284604 | |||
Public_name | tpra-1 | ||||||
DB_info | Database | AceView | gene | 4J731 | |||
WormQTL | gene | WBGene00008366 | |||||
WormFlux | gene | WBGene00008366 | |||||
NDB | locus_tag | CELE_D1046.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00008366|UniProtKB=Q18936 | |||||
family | PTHR15876 | ||||||
NCBI | gene | 259586 | |||||
RefSeq | protein | NM_001268429.3 | |||||
NM_001268428.2 | |||||||
SwissProt | UniProtAcc | Q18936 | |||||
TREEFAM | TREEFAM_ID | TF314072 | |||||
UniProt_GCRP | UniProtAcc | Q18936 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tpra | ||||||
Allele (119) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00062870 | ||||||
00062871 | |||||||
00062872 | |||||||
00062873 | |||||||
00062874 | |||||||
Ortholog (34) | |||||||
Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Expressed in head neurons and tail. Is an ortholog of human TPRA1 (transmembrane protein adipocyte associated 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | D1046.5a | |||||
D1046.5b | |||||||
Corresponding_CDS_history | D1046.5:wp92 | ||||||
Corresponding_transcript | D1046.5a.1 | ||||||
D1046.5b.1 | |||||||
Other_sequence | HCC07463_1 | ||||||
FC554711.1 | |||||||
CJC07875_1 | |||||||
FC546374.1 | |||||||
EX541643.1 | |||||||
Oden_isotig18580 | |||||||
ACC10637_1 | |||||||
EX541432.1 | |||||||
HC05642 | |||||||
Acan_isotig06072 | |||||||
Associated_feature (20) | |||||||
Experimental_info | RNAi_result | WBRNAi00012523 | Inferred_automatically | RNAi_primary | |||
WBRNAi00043380 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00092876 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (6) | |||||||
Drives_construct | WBCnstr00011721 | ||||||
WBCnstr00018440 | |||||||
WBCnstr00033022 | |||||||
Construct_product | WBCnstr00033022 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (189) | |||||||
Interaction (11) | |||||||
Map_info | Map | IV | Position | 3.99986 | Error | 2.8e-05 | |
Positive | Positive_clone | D1046 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00041549 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |