WormBase Tree Display for Gene: WBGene00008359
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| WBGene00008359 | SMap | S_parent | Sequence | D1025 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nspc-17 | Person_evidence | WBPerson655 | |||||
| Sequence_name | D1025.8 | ||||||||
| Molecular_name | D1025.8 | ||||||||
| D1025.8.1 | |||||||||
| CE34779 | |||||||||
| Other_name | CELE_D1025.8 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nspc-17 | ||||||||
| DB_info | Database | AceView | gene | XP142 | |||||
| WormQTL | gene | WBGene00008359 | |||||||
| WormFlux | gene | WBGene00008359 | |||||||
| NDB | locus_tag | CELE_D1025.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008359|UniProtKB=G5ECN6 | |||||||
| family | PTHR31330 | ||||||||
| NCBI | gene | 181548 | |||||||
| RefSeq | protein | NM_001029340.8 | |||||||
| TREEFAM | TREEFAM_ID | TF318876 | |||||||
| TrEMBL | UniProtAcc | G5ECN6 | |||||||
| UniProt_GCRP | UniProtAcc | G5ECN6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 May 2005 14:07:22 | WBPerson2970 | Name_change | CGC_name | nspc-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nspc | ||||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (260) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Enriched in NSM and excretory gland cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; and RNA-seq studies. Is affected by sixteen chemicals including hydrogen sulfide; mianserin; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1025.8 | |||||||
| Corresponding_transcript | D1025.8.1 | ||||||||
| Other_sequence | CJC04942_1 | ||||||||
| Associated_feature | WBsf982284 | ||||||||
| WBsf238240 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000932 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012513 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043360 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043361 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1147345 | ||||||||
| Expr2014467 | |||||||||
| Expr2032707 | |||||||||
| Drives_construct | WBCnstr00033029 | ||||||||
| Construct_product | WBCnstr00033029 | ||||||||
| Microarray_results | A_12_P102764 | ||||||||
| A_12_P103350 | |||||||||
| A_12_P138750 | |||||||||
| GPL19516_CGZ0013547 | |||||||||
| GPL19516_CGZ0013548 | |||||||||
| GPL19516_CGZ0013549 | |||||||||
| GPL21109_D1025.7 | |||||||||
| GPL21109_D1025.9 | |||||||||
| GPL8673_D1025_7P00024 | |||||||||
| GPL8673_D1025_8P00024 | |||||||||
| Expression_cluster (149) | |||||||||
| Map_info | Map | X | Position | 16.7307 | |||||
| Positive | Positive_clone | D1025 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
