WormBase Tree Display for Gene: WBGene00008356
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WBGene00008356 | SMap | S_parent | Sequence | D1025 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nspc-20 | Person_evidence | WBPerson655 | |||
Sequence_name | D1025.4 | ||||||
Molecular_name | D1025.4 | ||||||
D1025.4.1 | |||||||
CE17612 | |||||||
Other_name | CELE_D1025.4 | Accession_evidence | NDB | BX284606 | |||
Public_name | nspc-20 | ||||||
DB_info | Database | AceView | gene | XP148 | |||
WormQTL | gene | WBGene00008356 | |||||
WormFlux | gene | WBGene00008356 | |||||
NDB | locus_tag | CELE_D1025.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00008356|UniProtKB=G5ECP8 | |||||
family | PTHR31330 | ||||||
NCBI | gene | 181549 | |||||
RefSeq | protein | NM_078016.7 | |||||
TREEFAM | TREEFAM_ID | TF318876 | |||||
TrEMBL | UniProtAcc | G5ECP8 | |||||
UniProt_GCRP | UniProtAcc | G5ECP8 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nspc | ||||||
Allele (29) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (260) | |||||||
Paralog (17) | |||||||
Structured_description | Automated_description | Enriched in excretory gland cell and intestine based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including hydrogen sulfide; mianserin; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | D1025.4 | |||||
Corresponding_transcript | D1025.4.1 | ||||||
Associated_feature | WBsf1007932 | ||||||
WBsf1007933 | |||||||
WBsf1024417 | |||||||
WBsf1024418 | |||||||
WBsf238242 | |||||||
Experimental_info | RNAi_result | WBRNAi00012513 | Inferred_automatically | RNAi_primary | |||
WBRNAi00043360 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043361 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030330 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025177 | ||||||
Expr1147342 | |||||||
Expr2014471 | |||||||
Expr2032711 | |||||||
Drives_construct | WBCnstr00033032 | ||||||
Construct_product | WBCnstr00033032 | ||||||
Microarray_results | SMD_D1025.4 | ||||||
A_12_P133345 | |||||||
Aff_D1025.4 | |||||||
GPL8304_CE_WBGene00008356_A | |||||||
Expression_cluster (167) | |||||||
Interaction (196) | |||||||
Map_info | Map | X | Position | 16.7321 | |||
Positive | Positive_clone | D1025 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00064841 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |