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WormBase Tree Display for Gene: WBGene00008345

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Name Class

WBGene00008345SMapS_parentSequenceC56A3
IdentityVersion1
NameSequence_nameC56A3.6
Molecular_name (18)
Other_nameCELE_C56A3.6Accession_evidenceNDBBX284605
Public_nameC56A3.6
DB_infoDatabaseAceViewgene5O34
WormQTLgeneWBGene00008345
WormFluxgeneWBGene00008345
NDBlocus_tagCELE_C56A3.6
PanthergeneCAEEL|WormBase=WBGene00008345|UniProtKB=Q18874
familyPTHR12294
NCBIgene179837
RefSeqproteinNM_001269592.3
NM_001269590.3
NM_001373146.2
NM_001269591.3
NM_001269593.3
NM_001373147.2
TREEFAMTREEFAM_IDTF320374
TrEMBLUniProtAccD9N139
A0A486WVK8
D7SFN6
A0A486WWU3
D9N138
Q18874
UniProt_GCRPUniProtAccQ18874
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (84)
RNASeq_FPKM (74)
GO_annotation00003587
00003588
00003589
00003590
00116270
00116271
OrthologWBGene00028920Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00148245Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00138737Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00127811Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00052819Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00118080Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g52Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9398Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1891Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g3066Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19084Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g12084Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8273Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1983Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g24085Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g9175Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g7733Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00298.g8745Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C56A3.6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold524.g2981Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00119.g4826Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_03800Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_018596Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04942Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4438Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50161800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g16268Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00261282Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289080Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0038735Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-3374Danio rerioFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
ZFIN:ZDB-GENE-070713-1Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-120813-5Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:31830Homo sapiensFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
OrthoInspector
Panther
HGNC:27820Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1915764Mus musculusFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
OrthoInspector
Panther
MGI:1925756Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:619739Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1563411Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ParalogWBGene00013462Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Predicted to be involved in calcium import into the mitochondrion and mitochondrial calcium ion homeostasis. Predicted to be part of uniplex complex. Is an ortholog of human MICU3 (mitochondrial calcium uptake family member 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC56A3.6a
C56A3.6b
C56A3.6c
C56A3.6d
C56A3.6e
C56A3.6f
Corresponding_CDS_historyC56A3.6:wp90
C56A3.6:wp188
Corresponding_transcriptC56A3.6a.1
C56A3.6b.1
C56A3.6c.1
C56A3.6d.1
C56A3.6e.1
C56A3.6f.1
Other_sequence (46)
Associated_featureWBsf653321
WBsf653322
WBsf669598
WBsf669599
WBsf669600
WBsf1001842
WBsf1020735
WBsf1020736
Experimental_infoRNAi_resultWBRNAi00082470Inferred_automaticallyRNAi_primary
WBRNAi00030193Inferred_automaticallyRNAi_primary
WBRNAi00012451Inferred_automaticallyRNAi_primary
WBRNAi00082592Inferred_automaticallyRNAi_primary
WBRNAi00043256Inferred_automaticallyRNAi_primary
Expr_patternExpr1012906
Expr1033615
Expr1147236
Expr2001970
Expr2020194
Drives_constructWBCnstr00033037
Construct_productWBCnstr00033037
Microarray_results (25)
Expression_cluster (92)
Map_infoPositivePositive_cloneC56A3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV5.44777
ReferenceWBPaper00038491
WBPaper00055090
MethodGene