WormBase Tree Display for Gene: WBGene00008344
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| WBGene00008344 | SMap | S_parent | Sequence | C56A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C56A3.5 | |||||||
| Molecular_name | C56A3.5 | ||||||||
| C56A3.5.1 | |||||||||
| CE09033 | |||||||||
| Other_name | CELE_C56A3.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C56A3.5 | ||||||||
| DB_info | Database | AceView | gene | 5O31 | |||||
| WormQTL | gene | WBGene00008344 | |||||||
| WormFlux | gene | WBGene00008344 | |||||||
| NDB | locus_tag | CELE_C56A3.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008344|UniProtKB=Q18877 | |||||||
| family | PTHR37968 | ||||||||
| NCBI | gene | 183857 | |||||||
| RefSeq | protein | NM_073954.9 | |||||||
| TREEFAM | TREEFAM_ID | TF314712 | |||||||
| TrEMBL | UniProtAcc | Q18877 | |||||||
| UniProt_GCRP | UniProtAcc | Q18877 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00017264 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00017214 | |||||||||
| Structured_description | Automated_description | Enriched in body wall muscle cell and germ line based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; glp-1; and sir-2.1 based on microarray and RNA-seq studies. Is affected by seven chemicals including Zidovudine; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Leucine-rich repeat domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C56A3.5 | |||||||
| Corresponding_transcript | C56A3.5.1 | ||||||||
| Other_sequence | CR01434 | ||||||||
| CR11598 | |||||||||
| CRC00040_1 | |||||||||
| Associated_feature | WBsf647463 | ||||||||
| WBsf232785 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043255 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007775 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077822 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012450 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030192 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025196 | ||||||||
| Expr1033614 | |||||||||
| Expr1147235 | |||||||||
| Expr2001969 | |||||||||
| Expr2020193 | |||||||||
| Drives_construct | WBCnstr00033038 | ||||||||
| Construct_product | WBCnstr00033038 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (92) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Positive | Positive_clone | C56A3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 5.44556 | |||||||
| Method | Gene |
