WormBase Tree Display for Gene: WBGene00008323
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WBGene00008323 | SMap | S_parent | Sequence | C55A1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C55A1.6 | |||||||
Molecular_name | C55A1.6 | ||||||||
C55A1.6.1 | |||||||||
CE08992 | |||||||||
Other_name | CELE_C55A1.6 | Accession_evidence | NDB | BX284605 | |||||
Public_name | C55A1.6 | ||||||||
DB_info | Database | AceView | gene | 5Q121 | |||||
WormQTL | gene | WBGene00008323 | |||||||
WormFlux | gene | WBGene00008323 | |||||||
NDB | locus_tag | CELE_C55A1.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008323|UniProtKB=O17712 | |||||||
family | PTHR33272 | ||||||||
NCBI | gene | 183827 | |||||||
RefSeq | protein | NM_074492.2 | |||||||
TREEFAM | TREEFAM_ID | TF322318 | |||||||
TrEMBL | UniProtAcc | O17712 | |||||||
UniProt_GCRP | UniProtAcc | O17712 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (19) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00027286 | Caenorhabditis briggsae | From_analysis | OMA | |||||
WBGene00027300 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
WBGene00056922 | Caenorhabditis remanei | From_analysis | OMA | ||||||
TreeFam | |||||||||
WBGene00153052 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
WBGene00139772 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
WBGene00148560 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
WBGene00159617 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
WBGene00027295 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
CSP26.g15314 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP26.g15315 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP26.g15318 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP26.g15319 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP26.g19654 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP40.g4627 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cnig_chr_V.g20624 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold630.g19919 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00084.g3763 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_01041.g17857 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_11292 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_020275 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g16878 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00056928 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Paralog (21) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including GLR; MSpppaaa; coelomocyte; excretory system; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and let-7 based on microarray; proteomic; and RNA-seq studies. Is affected by thirteen chemicals including Mercuric Chloride; Sodium Chloride; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4473) and Protein of unknown function DUF4473. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C55A1.6 | |||||||
Corresponding_transcript | C55A1.6.1 | ||||||||
Associated_feature | WBsf647603 | ||||||||
WBsf233039 | |||||||||
Experimental_info | RNAi_result (3) | ||||||||
Expr_pattern | Expr1020580 | ||||||||
Expr1147183 | |||||||||
Expr2001944 | |||||||||
Expr2020167 | |||||||||
Drives_construct | WBCnstr00033055 | ||||||||
Construct_product | WBCnstr00033055 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (157) | |||||||||
Interaction (27) | |||||||||
Map_info | Positive | Positive_clone | C55A1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 8.54322 | |||||||
Method | Gene |