WormBase Tree Display for Gene: WBGene00008302

WBGene00008302 SMap: S_parent: Sequence: C54D10
  Identity: Version: 2
    Name: CGC_name: pals-38 Person_evidence: WBPerson260
      Sequence_name: C54D10.8
      Molecular_name: C54D10.8a
        WP:CE45432
        CE45432
        C54D10.8b
        WP:CE47766
        CE47766
        C54D10.8a.1
        C54D10.8b.1
      Other_name: CELE_C54D10.8 Accession_evidence: NDB BX284605
      Public_name: pals-38
    DB_info: Database: AceView gene 5M922
        WormQTL gene WBGene00008302
        WormFlux gene WBGene00008302
        NDB locus_tag CELE_C54D10.8
        NCBI gene 183785
        RefSeq mRNA NM_073720.3
            NM_001276943.1
          protein NP_001263872.1
            NP_506121.3
            NM_001276943.3
            NM_073720.5
        UniProt UniProtAcc J7RNJ4
            Q18826
        TrEMBL UniProtAcc J7RNJ4
            Q18826
        UniProt_GCRP UniProtAcc Q18826
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Oct 2016 09:42:35 WBPerson2970 Name_change: CGC_name: pals-38
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pals
    Allele (109)
    RNASeq_FPKM (74)
    Ortholog: WBGene00041843 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP26.g18880 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4999 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18547 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g4392 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g4393 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g1456 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g13542 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g1969 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g22422 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12255 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g18438 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_V.g18855 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g21665 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold417.g1120 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00388.g10568 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00843.g16010 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19920 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_20853 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018307 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_021696 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrV_pilon.g16018 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00065914 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00084188 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog: WBGene00044787 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Enriched in body wall muscle cell; intestine; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including Mercuric Chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C54D10.8a
      C54D10.8b
    Corresponding_CDS_history: C54D10.8:wp109
      C54D10.8:wp220
    Corresponding_transcript: C54D10.8a.1
      C54D10.8b.1
    Associated_feature: WBsf234680
      WBsf234681
  Experimental_info: RNAi_result: WBRNAi00012386 Inferred_automatically: RNAi_primary
      WBRNAi00043141 Inferred_automatically: RNAi_primary
      WBRNAi00070078 Inferred_automatically: RNAi_primary
      WBRNAi00030137 Inferred_automatically: RNAi_primary
      WBRNAi00102072 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014777
      Expr1147113
      Expr2014709
    Drives_construct: WBCnstr00033070
    Construct_product: WBCnstr00033070
    Microarray_results (17)
    Expression_cluster (207)
    Interaction: WBInteraction000151398
      WBInteraction000329309
      WBInteraction000373640
      WBInteraction000431455
  Map_info: Positive: Positive_clone: C54D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 4.23785
  Reference: WBPaper00062345
  Method: Gene