WormBase Tree Display for Gene: WBGene00008295
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WBGene00008295 | SMap | S_parent | Sequence | C54C8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nlp-39 | Person_evidence | WBPerson242 | |||||
Sequence_name | C54C8.9 | ||||||||
Molecular_name | C54C8.9 | ||||||||
C54C8.9.1 | |||||||||
CE08971 | |||||||||
Other_name | CELE_C54C8.9 | Accession_evidence | NDB | BX284601 | |||||
Public_name | nlp-39 | ||||||||
DB_info | Database | AceView | gene | 1N53 | |||||
WormQTL | gene | WBGene00008295 | |||||||
WormFlux | gene | WBGene00008295 | |||||||
NDB | locus_tag | CELE_C54C8.9 | |||||||
NCBI | gene | 183774 | |||||||
RefSeq | protein | NM_060762.5 | |||||||
TrEMBL | UniProtAcc | O17707 | |||||||
UniProt_GCRP | UniProtAcc | O17707 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 24 Oct 2005 15:35:58 | WBPerson2970 | Name_change | CGC_name | nlp-39 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nlp | ||||||||
Allele (15) | |||||||||
Strain | WBStrain00055186 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00030480 | ||||||||
Ortholog | chrI_pilon.g2510 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog | WBGene00044242 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Structured_description | Automated_description | Predicted to be involved in neuropeptide signaling pathway. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C54C8.9 | |||||||
Corresponding_transcript | C54C8.9.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00003225 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030133 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043125 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021772 | ||||||||
Expr1147094 | |||||||||
Microarray_results (14) | |||||||||
Expression_cluster (165) | |||||||||
Interaction (37) | |||||||||
Map_info | Map | I | Position | 13.2265 | Error | 0.000585 | |||
Positive | Positive_clone | C54C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00026655 | ||||||||
WBPaper00026994 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |