WormBase Tree Display for Gene: WBGene00008281
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| WBGene00008281 | SMap | S_parent | Sequence | C53D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C53D6.4 | |||||||
| Molecular_name | C53D6.4a | ||||||||
| C53D6.4a.1 | |||||||||
| CE45506 | |||||||||
| C53D6.4b | |||||||||
| CE49661 | |||||||||
| C53D6.4b.1 | |||||||||
| Other_name | CELE_C53D6.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C53D6.4 | ||||||||
| DB_info | Database | AceView | gene | 4J784 | |||||
| WormQTL | gene | WBGene00008281 | |||||||
| WormFlux | gene | WBGene00008281 | |||||||
| NDB | locus_tag | CELE_C53D6.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008281|UniProtKB=Q18810 | |||||||
| family | PTHR14684 | ||||||||
| NCBI | gene | 183759 | |||||||
| RefSeq | protein | NM_001380395.1 | |||||||
| NM_069167.5 | |||||||||
| TrEMBL | UniProtAcc | Q18810 | |||||||
| X5LXA5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q18810 | |||||||
| OMIM | gene | 617778 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00062420 | ||||||||
| 00062421 | |||||||||
| 00105519 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in cilium assembly. Predicted to be located in cilium. Human ortholog(s) of this gene implicated in Meckel syndrome. Is an ortholog of human TXNDC15 (thioredoxin domain containing 15). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050778 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20652) | ||||
| Molecular_info | Corresponding_CDS | C53D6.4a | |||||||
| C53D6.4b | |||||||||
| Corresponding_CDS_history | C53D6.4:wp117 | ||||||||
| C53D6.4:wp220 | |||||||||
| Corresponding_transcript | C53D6.4a.1 | ||||||||
| C53D6.4b.1 | |||||||||
| Other_sequence | CBC01289_1 | ||||||||
| Oden_isotig23501 | |||||||||
| ES744498.1 | |||||||||
| ES410496.1 | |||||||||
| Hbac_isotig04969 | |||||||||
| CRC11729_1 | |||||||||
| ES742339.1 | |||||||||
| HBC09957_1 | |||||||||
| CJC02660_1 | |||||||||
| Associated_feature | WBsf997338 | ||||||||
| WBsf230498 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043100 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012366 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028554 | ||||||||
| Expr1033596 | |||||||||
| Expr1147066 | |||||||||
| Expr2001897 | |||||||||
| Expr2020121 | |||||||||
| Drives_construct | WBCnstr00033087 | ||||||||
| Construct_product | WBCnstr00033087 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (83) | |||||||||
| Interaction | WBInteraction000380588 | ||||||||
| WBInteraction000388612 | |||||||||
| WBInteraction000437489 | |||||||||
| WBInteraction000446630 | |||||||||
| WBInteraction000450292 | |||||||||
| WBInteraction000451667 | |||||||||
| WBInteraction000458998 | |||||||||
| Map_info | Positive | Positive_clone | C53D6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.01185 | |||||||
| Method | Gene |
