WormBase Tree Display for Gene: WBGene00008231
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WBGene00008231 | SMap | S_parent | Sequence | C50F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tag-329 | |||||||
Sequence_name | C50F4.3 | ||||||||
Molecular_name | C50F4.3 | ||||||||
C50F4.3.1 | |||||||||
CE05468 | |||||||||
Other_name | CELE_C50F4.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | tag-329 | ||||||||
DB_info | Database | AceView | gene | 5K15 | |||||
WormQTL | gene | WBGene00008231 | |||||||
WormFlux | gene | WBGene00008231 | |||||||
NDB | locus_tag | CELE_C50F4.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008231|UniProtKB=Q18740 | |||||||
family | PTHR12411 | ||||||||
NCBI | gene | 183677 | |||||||
RefSeq | protein | NM_073057.5 | |||||||
TREEFAM | TREEFAM_ID | TF319730 | |||||||
TrEMBL | UniProtAcc | Q18740 | |||||||
UniProt_GCRP | UniProtAcc | Q18740 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Apr 2005 11:55:18 | WBPerson2970 | Name_change | CGC_name | tag-329 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tag | ||||||||
Allele (26) | |||||||||
Strain | WBStrain00036201 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00062171 | ||||||||
00062172 | |||||||||
00062173 | |||||||||
00116172 | |||||||||
00116173 | |||||||||
Ortholog (38) | |||||||||
Paralog (28) | |||||||||
Structured_description | Automated_description | Predicted to enable cysteine-type endopeptidase activity. Predicted to be involved in proteolysis involved in protein catabolic process. Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C50F4.3 | |||||||
Corresponding_transcript | C50F4.3.1 | ||||||||
Other_sequence | FD516976.1 | ||||||||
CSC01637_1 | |||||||||
CBC13740_1 | |||||||||
Associated_feature | WBsf232266 | ||||||||
Experimental_info | RNAi_result | WBRNAi00042943 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012236 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076231 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089013 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030043 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112663 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00115189 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1013356 | ||||||||
Expr1146912 | |||||||||
Expr2017274 | |||||||||
Expr2035409 | |||||||||
Drives_construct | WBCnstr00033132 | ||||||||
Construct_product | WBCnstr00033132 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (83) | |||||||||
Interaction (17) | |||||||||
Map_info | Map | V | Position | 2.04554 | Error | 0.000961 | |||
Positive | Positive_clone | C50F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5100 | |||||||
4426 | |||||||||
4485 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00055090 | ||||||||
WBPaper00059755 | |||||||||
WBPaper00065267 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |