WormBase Tree Display for Gene: WBGene00008198
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| WBGene00008198 | SMap | S_parent | Sequence | C49C3 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Allele (75) | ||||||
| RNASeq_FPKM (74) | ||||||
| Ortholog (16) | ||||||
| Structured_description | Automated_description | Enriched in several structures, including body wall muscle cell; excretory cell; germ line; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including Alovudine; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info (5) | ||||||
| Experimental_info | RNAi_result | WBRNAi00042779 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00029971 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00012129 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00042786 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1013488 | |||||
| Expr1033562 | ||||||
| Expr1146770 | ||||||
| Expr2001768 | ||||||
| Expr2019996 | ||||||
| Drives_construct | WBCnstr00033164 | |||||
| Construct_product | WBCnstr00033164 | |||||
| Microarray_results (17) | ||||||
| Expression_cluster (99) | ||||||
| SAGE_tag | SAGE:ccgatagaagcttgtat | Strand | Sense | |||
| Unambiguously_mapped | ||||||
| SAGE:aatgatttgg | Strand | Sense | ||||
| Unambiguously_mapped | ||||||
| SAGE:ctcgaatcctagtgtat | Strand | Antisense | ||||
| SAGE:cgccgcttgc | Strand | Antisense | ||||
| SAGE:aatgatttggaagatct | Strand | Sense | ||||
| Unambiguously_mapped | ||||||
| SAGE:cgccgcttgcgatacgg | Strand | Antisense | ||||
| SAGE:ctcgaatcct | Strand | Antisense | ||||
| Interaction | WBInteraction000281816 | |||||
| WBInteraction000310677 | ||||||
| WBInteraction000326798 | ||||||
| WBInteraction000346426 | ||||||
| WBInteraction000392170 | ||||||
| WBInteraction000435856 | ||||||
| WBInteraction000452877 | ||||||
| Map_info | Positive | Positive_clone | C49C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |
| Interpolated_map_position | IV | 16.4941 | ||||
| Method | Gene |
