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WormBase Tree Display for Gene: WBGene00008188

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Name Class

WBGene00008188SMapS_parentSequenceC49A1
IdentityVersion2
NameCGC_nameclec-115Person_evidenceWBPerson2531
Sequence_nameC49A1.6
Molecular_nameC49A1.6
C49A1.6.1
CE43276
Other_nameCELE_C49A1.6Accession_evidenceNDBBX284601
Public_nameclec-115
DB_infoDatabaseAceViewgene1O839
WormQTLgeneWBGene00008188
WormFluxgeneWBGene00008188
NDBlocus_tagCELE_C49A1.6
PanthergeneCAEEL|WormBase=WBGene00008188|UniProtKB=O17672
familyPTHR47629
NCBIgene183588
RefSeqproteinNM_061086.2
TREEFAMTREEFAM_IDTF315870
TrEMBLUniProtAccO17672
UniProt_GCRPUniProtAccO17672
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
209 Oct 2007 15:40:27WBPerson2970Name_changeCGC_nameclec-115
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (28)
RNASeq_FPKM (74)
Ortholog (20)
Paralog (127)
Structured_descriptionAutomated_descriptionIs affected by eat-2; etr-1; and sir-2.1 based on RNA-seq and microarray studies. Is affected by resveratrol; Chlorpyrifos; and Diazinon based on microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; PAN-like domain; PAN-3 domain; and C-type lectin fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC49A1.6
Corresponding_CDS_historyC49A1.6:wp196
Corresponding_transcriptC49A1.6.1
Associated_featureWBsf986107
WBsf986108
Experimental_infoRNAi_resultWBRNAi00042758Inferred_automaticallyRNAi_primary
WBRNAi00003204Inferred_automaticallyRNAi_primary
Expr_patternExpr1026534
Expr1146746
Expr2010059
Expr2028300
Drives_constructWBCnstr00033170
Construct_productWBCnstr00033170
Microarray_results (14)
Expression_cluster (24)
Interaction (31)
Map_infoMapIPosition24.0114Error0.028056
PositivePositive_cloneC49A1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene