WormBase Tree Display for Gene: WBGene00008180
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| WBGene00008180 | SMap | S_parent | Sequence | C48D5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C48D5.3 | |||||||
| Molecular_name | C48D5.3 | ||||||||
| C48D5.3.1 | |||||||||
| CE44237 | |||||||||
| Other_name | CELE_C48D5.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C48D5.3 | ||||||||
| DB_info | Database | AceView | gene | 3E668 | |||||
| WormQTL | gene | WBGene00008180 | |||||||
| WormFlux | gene | WBGene00008180 | |||||||
| NDB | locus_tag | CELE_C48D5.3 | |||||||
| NCBI | gene | 3564935 | |||||||
| RefSeq | protein | NM_001026057.4 | |||||||
| TrEMBL | UniProtAcc | Q7YX49 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YX49 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (41) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; ABplaaaaaa; PLM; head mesodermal cell; and rect_D based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by eight chemicals including metformin; Sirolimus; and antimycin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C48D5.3 | |||||||
| Corresponding_CDS_history | C48D5.3:wp208 | ||||||||
| Corresponding_transcript | C48D5.3.1 | ||||||||
| Other_sequence | ASC02842_1 | ||||||||
| AS10898 | |||||||||
| SS02168 | |||||||||
| SSC02119_1 | |||||||||
| JI212706.1 | |||||||||
| Name_isotig04820 | |||||||||
| Associated_feature | WBsf716729 | ||||||||
| WBsf991818 | |||||||||
| WBsf991819 | |||||||||
| WBsf991820 | |||||||||
| WBsf991821 | |||||||||
| WBsf991822 | |||||||||
| WBsf1014590 | |||||||||
| WBsf1014591 | |||||||||
| Experimental_info | Expr_pattern | Expr1013697 | |||||||
| Expr1146728 | |||||||||
| Expr2001746 | |||||||||
| Expr2019974 | |||||||||
| Drives_construct | WBCnstr00033175 | ||||||||
| Construct_product | WBCnstr00033175 | ||||||||
| Microarray_results | A_12_P116477 | ||||||||
| GPL13394_WBGene00008180 | |||||||||
| GPL13914_C48D5.3 | |||||||||
| GPL14144_C48D5.3_465-524_0.951_1_A | |||||||||
| GPL19516_CGZ0009666 | |||||||||
| GPL21109_C48D5.3 | |||||||||
| GPL8304_CE_WBGene00008180_A | |||||||||
| GPL8673_C48D5_3P00169 | |||||||||
| GPL8673_C48D5_3P00208 | |||||||||
| GPL8673_C48D5_3P00420 | |||||||||
| Expression_cluster (92) | |||||||||
| Map_info | Positive | Positive_clone | C48D5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -5.46529 | |||||||
| Method | Gene |
