WormBase Tree Display for Gene: WBGene00008125
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| WBGene00008125 | SMap | S_parent | Sequence | C47A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C47A4.5 | |||||||
| Molecular_name | C47A4.5 | ||||||||
| C47A4.5.1 | |||||||||
| CE19740 | |||||||||
| Other_name | CELE_C47A4.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C47A4.5 | ||||||||
| DB_info | Database | AceView | gene | 4O511 | |||||
| WormQTL | gene | WBGene00008125 | |||||||
| WormFlux | gene | WBGene00008125 | |||||||
| NDB | locus_tag | CELE_C47A4.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008125|UniProtKB=Q9U3L6 | |||||||
| family | PTHR38629 | ||||||||
| NCBI | gene | 183526 | |||||||
| RefSeq | protein | NM_001380522.1 | |||||||
| TREEFAM | TREEFAM_ID | TF319906 | |||||||
| TrEMBL | UniProtAcc | Q9U3L6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U3L6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00010466 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012871 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044263 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00010956 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00010474 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell; intestine; and in male based on RNA-seq and microarray studies. Is affected by several genes including daf-2; dpy-10; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-one chemicals including aldicarb; methylmercuric chloride; and D-glucose based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C47A4.5 | |||||||
| Corresponding_transcript | C47A4.5.1 | ||||||||
| Other_sequence | Tcir_isotig17061 | ||||||||
| Associated_feature | WBsf998453 | ||||||||
| WBsf998454 | |||||||||
| WBsf1018568 | |||||||||
| WBsf1018569 | |||||||||
| WBsf229453 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056585 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029892 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012060 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020596 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092995 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042647 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014509 | ||||||||
| Expr1146635 | |||||||||
| Drives_construct | WBCnstr00033220 | ||||||||
| Construct_product | WBCnstr00033220 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Positive | Positive_clone | C47A4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 10.6942 | |||||||
| Method | Gene |
