WormBase Tree Display for Gene: WBGene00008066
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WBGene00008066 | SMap | S_parent | Sequence | C43D7 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | fbxb-65 | Person_evidence | WBPerson655 | |||
Sequence_name | C43D7.2 | ||||||
Molecular_name | C43D7.2 | ||||||
C43D7.2.1 | |||||||
CE18547 | |||||||
Other_name | CELE_C43D7.2 | Accession_evidence | NDB | BX284605 | |||
Public_name | fbxb-65 | ||||||
DB_info | Database | AceView | gene | 5T805 | |||
WormQTL | gene | WBGene00008066 | |||||
WormFlux | gene | WBGene00008066 | |||||
NDB | locus_tag | CELE_C43D7.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00008066|UniProtKB=Q9XVB8 | |||||
family | PTHR22899 | ||||||
NCBI | gene | 180268 | |||||
RefSeq | protein | NM_075365.6 | |||||
TrEMBL | UniProtAcc | Q9XVB8 | |||||
UniProt_GCRP | UniProtAcc | Q9XVB8 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxb | ||||||
Allele (76) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00041169 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||
WBGene00034924 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||
WBGene00089092 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||
chrV_pilon.g17872 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog (143) | |||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enriched in several structures, including ABalppappa; ABalpppapa; ABalppppaa; ABalpppppa; and ciliated neurons based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including daf-2; eat-2; and tph-1 based on RNA-seq and microarray studies. Is affected by fourteen chemicals including methylmercuric chloride; multi-walled carbon nanotube; and bisphenol S based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C43D7.2 | |||||
Corresponding_transcript | C43D7.2.1 | ||||||
Associated_feature | WBsf647716 | ||||||
WBsf662227 | |||||||
WBsf1003216 | |||||||
WBsf1003217 | |||||||
WBsf1003218 | |||||||
WBsf1021718 | |||||||
WBsf1021719 | |||||||
Experimental_info | RNAi_result | WBRNAi00011882 | Inferred_automatically | RNAi_primary | |||
WBRNAi00019952 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042372 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00029755 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062158 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1016709 | ||||||
Expr1033501 | |||||||
Expr1146359 | |||||||
Expr2011666 | |||||||
Expr2029905 | |||||||
Drives_construct | WBCnstr00033262 | ||||||
Construct_product | WBCnstr00033262 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (115) | |||||||
Interaction (129) | |||||||
Map_info | Map | V | Position | 21.3965 | Error | 0.056118 | |
Positive | Positive_clone | C43D7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00012854 | ||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |