WormBase Tree Display for Gene: WBGene00008061
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| WBGene00008061 | SMap | S_parent | Sequence | C41G7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | mina-1 | Paper_evidence | WBPaper00056165 | |||||
| Person_evidence | WBPerson3875 | ||||||||
| WBPerson250 | |||||||||
| Sequence_name | C41G7.3 | ||||||||
| Molecular_name | C41G7.3 | ||||||||
| C41G7.3.1 | |||||||||
| CE42810 | |||||||||
| Other_name | CELE_C41G7.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | mina-1 | ||||||||
| DB_info | Database | AceView | gene | 1K94 | |||||
| WormQTL | gene | WBGene00008061 | |||||||
| WormFlux | gene | WBGene00008061 | |||||||
| NDB | locus_tag | CELE_C41G7.3 | |||||||
| NCBI | gene | 172786 | |||||||
| RefSeq | protein | NM_060127.6 | |||||||
| SwissProt | UniProtAcc | Q93367 | |||||||
| UniProt_GCRP | UniProtAcc | Q93367 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jun 2008 14:47:36 | WBPerson1983 | Event | Split_into | WBGene00077771 | ||||
| 3 | 02 Sep 2019 17:25:14 | WBPerson1983 | Name_change | CGC_name | mina-1 | ||||
| Split_into | WBGene00077771 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mina | ||||||||
| Allele (30) | |||||||||
| Strain | WBStrain00036284 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP1985 | ||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Enables mRNA 3'-UTR binding activity. Acts upstream of or within with a positive effect on negative regulation of apoptotic process and negative regulation of gene expression, epigenetic. Predicted to be located in cytoplasm and nucleus. Expressed in oocyte. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C41G7.3 | |||||||
| Corresponding_CDS_history | C41G7.3:wp192 | ||||||||
| Corresponding_transcript | C41G7.3.1 | ||||||||
| Other_sequence | CR02256 | ||||||||
| CBC05283_1 | |||||||||
| CRC00466_1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042317 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003133 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14588 | ||||||||
| Expr14589 | |||||||||
| Expr1011542 | |||||||||
| Expr1033499 | |||||||||
| Expr1146306 | |||||||||
| Expr2001569 | |||||||||
| Expr2019791 | |||||||||
| Drives_construct | WBCnstr00033267 | ||||||||
| WBCnstr00040619 | |||||||||
| WBCnstr00040620 | |||||||||
| Construct_product | WBCnstr00033267 | ||||||||
| WBCnstr00040620 | |||||||||
| Regulate_expr_cluster | WBPaper00056165:mina-1(ok1521)_downregulated_protein | ||||||||
| WBPaper00056165:mina-1(ok1521)_downregulated_transcript | |||||||||
| WBPaper00056165:mina-1(ok1521)_upregulated_protein | |||||||||
| WBPaper00056165:mina-1(ok1521)_upregulated_transcript | |||||||||
| WBPaper00056165:MINA-1_interacting_mRNA | |||||||||
| Microarray_results | SMD_C41G7.3 | ||||||||
| 174486_at | |||||||||
| 174487_s_at | |||||||||
| Aff_C41G7.3 | |||||||||
| GPL14144_C41G7.3_1072-1131_0.966_1_B | |||||||||
| GPL14144_C41G7.3_4-63_0.852_37_A | |||||||||
| GPL14144_C41G7.3_865-924_0.945_5_C | |||||||||
| GPL19516_CGZ0008528 | |||||||||
| GPL21109_C41G7.3 | |||||||||
| GPL8673_C41G7_3P00886 | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction (237) | |||||||||
| Map_info | Map | I | Position | 3.78761 | |||||
| Positive | Positive_clone | C41G7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035228 | ||||||||
| WBPaper00042612 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
