WormBase Tree Display for Gene: WBGene00007997
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| WBGene00007997 | SMap | S_parent | Sequence | C38C6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sre-13 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C38C6.4 | ||||||||
| Molecular_name | C38C6.4 | ||||||||
| C38C6.4.1 | |||||||||
| CE38042 | |||||||||
| Other_name | CELE_C38C6.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sre-13 | ||||||||
| DB_info | Database | AceView | gene | 2O918 | |||||
| WormQTL | gene | WBGene00007997 | |||||||
| WormFlux | gene | WBGene00007997 | |||||||
| NDB | locus_tag | CELE_C38C6.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007997|UniProtKB=O45300 | |||||||
| family | PTHR47518 | ||||||||
| NCBI | gene | 183306 | |||||||
| RefSeq | protein | NM_064641.4 | |||||||
| SwissProt | UniProtAcc | O45300 | |||||||
| TREEFAM | TREEFAM_ID | TF316213 | |||||||
| UniProt_GCRP | UniProtAcc | O45300 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sre | ||||||||
| Allele (44) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034180 | ||||||||
| 00034181 | |||||||||
| 00115980 | |||||||||
| 00115981 | |||||||||
| Ortholog (20) | |||||||||
| Paralog (47) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C38C6.4 | |||||||
| Corresponding_CDS_history | C38C6.4:wp139 | ||||||||
| Corresponding_transcript | C38C6.4.1 | ||||||||
| Other_sequence | Dviv_isotig24623 | ||||||||
| Associated_feature | WBsf981366 | ||||||||
| WBsf990769 | |||||||||
| WBsf1013876 | |||||||||
| WBsf224299 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042149 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011751 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021909 | ||||||||
| Expr1146151 | |||||||||
| Expr2016267 | |||||||||
| Expr2034496 | |||||||||
| Drives_construct | WBCnstr00033321 | ||||||||
| Construct_product | WBCnstr00033321 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (52) | |||||||||
| Interaction | WBInteraction000137892 | ||||||||
| WBInteraction000308108 | |||||||||
| WBInteraction000368050 | |||||||||
| WBInteraction000438924 | |||||||||
| WBInteraction000449695 | |||||||||
| WBInteraction000450014 | |||||||||
| WBInteraction000456931 | |||||||||
| WBInteraction000461249 | |||||||||
| Map_info | Map | II | Position | 23.2357 | Error | 0.013722 | |||
| Positive | Positive_clone | C38C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
