WormBase Tree Display for Gene: WBGene00007939
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| WBGene00007939 | SMap | S_parent | Sequence | C34F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | C34F6.5 | |||||||
| Molecular_name | C34F6.5a | ||||||||
| C34F6.5a.1 | |||||||||
| CE45787 | |||||||||
| C34F6.5b | |||||||||
| CE45711 | |||||||||
| C34F6.5b.1 | |||||||||
| Other_name | CELE_C34F6.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C34F6.5 | ||||||||
| DB_info | Database | AceView | gene | XL828 | |||||
| WormQTL | gene | WBGene00007939 | |||||||
| WormFlux | gene | WBGene00007939 | |||||||
| NDB | locus_tag | CELE_C34F6.5 | |||||||
| NCBI | gene | 183215 | |||||||
| RefSeq | protein | NM_001392842.1 | |||||||
| NM_001270208.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF350662 | |||||||
| TrEMBL | UniProtAcc | O17639 | |||||||
| E9P891 | |||||||||
| UniProt_GCRP | UniProtAcc | O17639 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Jan 2011 10:43:00 | WBPerson1983 | Event | Acquires_merge | WBGene00007940 | ||||
| Acquires_merge | WBGene00007940 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpapppa; ABaraapapp; ABaraapppp; amphid neurons; and pharynx based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including hsf-1; eat-2; and elt-2 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including Tamoxifen; paraquat; and resveratrol based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34F6.5a | |||||||
| C34F6.5b | |||||||||
| Corresponding_CDS_history | C34F6.5:wp223 | ||||||||
| C34F6.6:wp223 | |||||||||
| Corresponding_transcript | C34F6.5a.1 | ||||||||
| C34F6.5b.1 | |||||||||
| Associated_feature | WBsf654395 | ||||||||
| WBsf669974 | |||||||||
| WBsf1006932 | |||||||||
| WBsf1006933 | |||||||||
| WBsf1023828 | |||||||||
| WBsf1023829 | |||||||||
| WBsf237941 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011626 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041922 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041923 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029548 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011627 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014206 | ||||||||
| Expr1033446 | |||||||||
| Expr1145930 | |||||||||
| Expr2001412 | |||||||||
| Expr2019635 | |||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction | WBInteraction000268093 | ||||||||
| WBInteraction000575547 | |||||||||
| Map_info | Positive | Positive_clone | C34F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 2.86242 | |||||||
| Method | Gene |
