WormBase Tree Display for Gene: WBGene00007919
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WBGene00007919 | SMap | S_parent | Sequence | C34C6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | cup-16 | Paper_evidence | WBPaper00050677 | |||
Person_evidence | WBPerson170 | ||||||
Sequence_name | C34C6.7 | ||||||
Molecular_name | C34C6.7a | ||||||
C34C6.7a.1 | |||||||
CE43435 | |||||||
C34C6.7b | |||||||
CE43411 | |||||||
C34C6.7b.1 | |||||||
Other_name | CELE_C34C6.7 | Accession_evidence | NDB | BX284602 | |||
Public_name | cup-16 | ||||||
DB_info | Database | AceView | gene | 2I997 | |||
WormQTL | gene | WBGene00007919 | |||||
WormFlux | gene | WBGene00007919 | |||||
NDB | locus_tag | CELE_C34C6.7 | |||||
NCBI | gene | 174393 | |||||
RefSeq | protein | NM_001267252.2 | |||||
NM_001267253.3 | |||||||
TrEMBL | UniProtAcc | B7WN89 | |||||
B7WN88 | |||||||
UniProt_GCRP | UniProtAcc | B7WN88 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cup | ||||||
Allele (29) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00006496 | ||||||
00006497 | |||||||
00006498 | |||||||
00006499 | |||||||
00006500 | |||||||
Ortholog (17) | |||||||
Structured_description | Automated_description | Involved in endocytosis and lysosomal protein catabolic process. Predicted to be located in lysosome. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C34C6.7a | |||||
C34C6.7b | |||||||
Corresponding_CDS_history | C34C6.7:wp198 | ||||||
Corresponding_transcript | C34C6.7a.1 | ||||||
C34C6.7b.1 | |||||||
Associated_feature | WBsf657989 | ||||||
WBsf988799 | |||||||
WBsf221805 | |||||||
Experimental_info | RNAi_result | WBRNAi00041856 | Inferred_automatically | RNAi_primary | |||
WBRNAi00011583 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1022610 | ||||||
Expr1033433 | |||||||
Expr1145874 | |||||||
Expr2010594 | |||||||
Expr2028834 | |||||||
Drives_construct | WBCnstr00033382 | ||||||
Construct_product | WBCnstr00033382 | ||||||
Microarray_results (16) | |||||||
Expression_cluster (267) | |||||||
Interaction (170) | |||||||
Map_info | Map | II | Position | 0.85112 | |||
Positive | Positive_clone | C34C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00050677 | ||||||
WBPaper00062388 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |