WormBase Tree Display for Gene: WBGene00007919

WBGene00007919 SMap: S_parent: Sequence: C34C6
  Identity: Version: 2
    Name: CGC_name: cup-16 Paper_evidence: WBPaper00050677
          Person_evidence: WBPerson170
      Sequence_name: C34C6.7
      Molecular_name: C34C6.7a
        C34C6.7a.1
        CE43435
        C34C6.7b
        CE43411
        C34C6.7b.1
      Other_name: CELE_C34C6.7 Accession_evidence: NDB BX284602
      Public_name: cup-16
    DB_info: Database: AceView gene 2I997
        WormQTL gene WBGene00007919
        WormFlux gene WBGene00007919
        NDB locus_tag CELE_C34C6.7
        NCBI gene 174393
        RefSeq protein NM_001267252.2
            NM_001267253.3
        TrEMBL UniProtAcc B7WN89
            B7WN88
        UniProt_GCRP UniProtAcc B7WN88
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 Feb 2017 10:41:21 WBPerson2970 Name_change: CGC_name: cup-16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cup
    Allele (29)
    RNASeq_FPKM (74)
    GO_annotation: 00006496
      00006497
      00006498
      00006499
      00006500
    Ortholog (17)
    Structured_description: Automated_description: Involved in endocytosis and lysosomal protein catabolic process. Predicted to be located in lysosome. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C34C6.7a
      C34C6.7b
    Corresponding_CDS_history: C34C6.7:wp198
    Corresponding_transcript: C34C6.7a.1
      C34C6.7b.1
    Associated_feature: WBsf657989
      WBsf988799
      WBsf221805
  Experimental_info: RNAi_result: WBRNAi00041856 Inferred_automatically: RNAi_primary
      WBRNAi00011583 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022610
      Expr1033433
      Expr1145874
      Expr2010594
      Expr2028834
    Drives_construct: WBCnstr00033382
    Construct_product: WBCnstr00033382
    Microarray_results (16)
    Expression_cluster (267)
    Interaction: WBInteraction000032016
      WBInteraction000105963
      WBInteraction000109107
      WBInteraction000117548
      WBInteraction000118188
      WBInteraction000119684
      WBInteraction000120385
      WBInteraction000121709
      WBInteraction000125314
      WBInteraction000126888
      WBInteraction000127546
      WBInteraction000137804
      WBInteraction000141008
      WBInteraction000142385
      WBInteraction000143597
      WBInteraction000147723
      WBInteraction000148112
      WBInteraction000149299
      WBInteraction000149672
      WBInteraction000149740
      WBInteraction000149799
      WBInteraction000156837
      WBInteraction000164995
      WBInteraction000168719
      WBInteraction000170420
      WBInteraction000170647
      WBInteraction000171652
      WBInteraction000171966
      WBInteraction000172588
      WBInteraction000175184
      WBInteraction000176695
      WBInteraction000176841
      WBInteraction000178667
      WBInteraction000183798
      WBInteraction000183899
      WBInteraction000184420
      WBInteraction000185011
      WBInteraction000188978
      WBInteraction000190181
      WBInteraction000190588
      WBInteraction000199454
      WBInteraction000199816
      WBInteraction000201988
      WBInteraction000203239
      WBInteraction000206459
      WBInteraction000206970
      WBInteraction000207008
      WBInteraction000208911
      WBInteraction000209144
      WBInteraction000209407
      WBInteraction000210649
      WBInteraction000213402
      WBInteraction000213978
      WBInteraction000215986
      WBInteraction000216266
      WBInteraction000216562
      WBInteraction000217097
      WBInteraction000219287
      WBInteraction000219378
      WBInteraction000222717
      WBInteraction000223667
      WBInteraction000223906
      WBInteraction000224954
      WBInteraction000225616
      WBInteraction000226730
      WBInteraction000229965
      WBInteraction000231234
      WBInteraction000232402
      WBInteraction000233763
      WBInteraction000234448
      WBInteraction000238941
      WBInteraction000239155
      WBInteraction000239493
      WBInteraction000239534
      WBInteraction000240801
      WBInteraction000243072
      WBInteraction000244983
      WBInteraction000246239
      WBInteraction000246801
      WBInteraction000250139
      WBInteraction000251871
      WBInteraction000254507
      WBInteraction000254678
      WBInteraction000256799
      WBInteraction000259148
      WBInteraction000263622
      WBInteraction000263793
      WBInteraction000267082
      WBInteraction000269494
      WBInteraction000269887
      WBInteraction000273070
      WBInteraction000277477
      WBInteraction000279413
      WBInteraction000280358
      WBInteraction000280394
      WBInteraction000289037
      WBInteraction000301258
      WBInteraction000303082
      WBInteraction000307384
      WBInteraction000307685
      WBInteraction000308586
      WBInteraction000312410
      WBInteraction000316593
      WBInteraction000319629
      WBInteraction000330694
      WBInteraction000331589
      WBInteraction000331897
      WBInteraction000335161
      WBInteraction000338713
      WBInteraction000339233
      WBInteraction000341688
      WBInteraction000342585
      WBInteraction000344470
      WBInteraction000345431
      WBInteraction000345884
      WBInteraction000346078
      WBInteraction000348703
      WBInteraction000349707
      WBInteraction000350354
      WBInteraction000352150
      WBInteraction000352520
      WBInteraction000356819
      WBInteraction000356908
      WBInteraction000358794
      WBInteraction000359739
      WBInteraction000360941
      WBInteraction000361902
      WBInteraction000363093
      WBInteraction000363785
      WBInteraction000363885
      WBInteraction000366380
      WBInteraction000367008
      WBInteraction000369343
      WBInteraction000370017
      WBInteraction000377132
      WBInteraction000379318
      WBInteraction000379385
      WBInteraction000391495
      WBInteraction000392236
      WBInteraction000394679
      WBInteraction000398190
      WBInteraction000398841
      WBInteraction000402192
      WBInteraction000403869
      WBInteraction000404628
      WBInteraction000409530
      WBInteraction000409742
      WBInteraction000412072
      WBInteraction000414986
      WBInteraction000416814
      WBInteraction000417340
      WBInteraction000419295
      WBInteraction000420846
      WBInteraction000421511
      WBInteraction000421882
      WBInteraction000422302
      WBInteraction000422912
      WBInteraction000424794
      WBInteraction000424984
      WBInteraction000430112
      WBInteraction000432731
      WBInteraction000438585
      WBInteraction000443809
      WBInteraction000443815
      WBInteraction000446352
      WBInteraction000449671
      WBInteraction000451286
      WBInteraction000456344
      WBInteraction000457730
      WBInteraction000461711
  Map_info: Map: II Position: 0.85112
    Positive: Positive_clone: C34C6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00050677
    WBPaper00062388
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene