WormBase Tree Display for Gene: WBGene00007885
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| WBGene00007885 | SMap | S_parent | Sequence | C33A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ugt-21 | Person_evidence | WBPerson1208 | |||||
| WBPerson655 | |||||||||
| Sequence_name | C33A12.6 | ||||||||
| Molecular_name | C33A12.6a | ||||||||
| C33A12.6a.1 | |||||||||
| CE43641 | |||||||||
| C33A12.6b | |||||||||
| CE49766 | |||||||||
| C33A12.6b.1 | |||||||||
| Other_name | CELE_C33A12.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ugt-21 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jun 2005 11:17:00 | WBPerson2970 | Name_change | CGC_name | ugt-21 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ugt | ||||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000394 | ||||||||
| 00000395 | |||||||||
| 00000396 | |||||||||
| 00000397 | |||||||||
| 00000398 | |||||||||
| 00000399 | |||||||||
| 00000400 | |||||||||
| 00000401 | |||||||||
| 00115882 | |||||||||
| Ortholog (83) | |||||||||
| Paralog (74) | |||||||||
| Structured_description | Automated_description | Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of human UGT3A1 (UDP glycosyltransferase family 3 member A1) and UGT3A2 (UDP glycosyltransferase family 3 member A2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C33A12.6a | |||||||
| C33A12.6b | |||||||||
| Corresponding_CDS_history | C33A12.6:wp201 | ||||||||
| Corresponding_transcript | C33A12.6a.1 | ||||||||
| C33A12.6b.1 | |||||||||
| Other_sequence | Oden_isotig12419 | ||||||||
| CSC01827_1 | |||||||||
| CJC10061_1 | |||||||||
| EX538801.1 | |||||||||
| FD514360.1 | |||||||||
| CBC13893_1 | |||||||||
| Acan_isotig08646 | |||||||||
| Associated_feature | WBsf646236 | ||||||||
| WBsf228837 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011511 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029451 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041732 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023072 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028231 | ||||||||
| Expr1145750 | |||||||||
| Expr2017766 | |||||||||
| Expr2035904 | |||||||||
| Drives_construct | WBCnstr00033409 | ||||||||
| Construct_product | WBCnstr00033409 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (260) | |||||||||
| SAGE_tag | SAGE:agaaaatggg | Strand | Antisense | ||||||
| SAGE:aaagaaacat | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:cgtgacaaat | Strand | Antisense | |||||||
| SAGE:ggagaacgat | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:aaagaaacattagaaaa | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:atcaaaacga | Strand | Antisense | |||||||
| SAGE:gtggagctgtagtaatt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:tcaaagtttt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:actttctatc | Strand | Antisense | |||||||
| SAGE:ggagaacgattagggaa | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction | WBInteraction000400095 | ||||||||
| WBInteraction000445383 | |||||||||
| WBInteraction000585669 | |||||||||
| Map_info | Map | IV | Position | 4.28344 | Error | 0.000396 | |||
| Positive | Positive_clone | C33A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028352 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055433 | |||||||||
| WBPaper00061938 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
