WormBase Tree Display for Gene: WBGene00007869
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| WBGene00007869 | SMap | S_parent | Sequence | C32H11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srlf-5 | Person_evidence | WBPerson260 | |||||
| Laboratory_evidence | OH | ||||||||
| Sequence_name | C32H11.6 | ||||||||
| Molecular_name | C32H11.6 | ||||||||
| C32H11.6.1 | |||||||||
| CE19713 | |||||||||
| Other_name | C32H11.6 | ||||||||
| CELE_C32H11.6 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | srlf-5 | ||||||||
| DB_info | Database | AceView | gene | 4N690 | |||||
| WormQTL | gene | WBGene00007869 | |||||||
| WormFlux | gene | WBGene00007869 | |||||||
| NDB | locus_tag | CELE_C32H11.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007869|UniProtKB=Q9XUH5 | |||||||
| family | PTHR21593 | ||||||||
| NCBI | gene | 183130 | |||||||
| RefSeq | protein | NM_070067.3 | |||||||
| TREEFAM | TREEFAM_ID | TF319454 | |||||||
| TrEMBL | UniProtAcc | Q9XUH5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUH5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Oct 2022 15:59:20 | WBPerson21950 | Name_change | CGC_name | srlf-5 | ||||
| Other_name | C32H11.6 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srlf | ||||||||
| Allele | WBVar01500079 | ||||||||
| WBVar01498996 | |||||||||
| WBVar01499925 | |||||||||
| WBVar00951250 | |||||||||
| WBVar00951251 | |||||||||
| WBVar00951252 | |||||||||
| WBVar00951253 | |||||||||
| WBVar00270827 | |||||||||
| WBVar01570538 | |||||||||
| WBVar00951254 | |||||||||
| WBVar01570539 | |||||||||
| WBVar00951255 | |||||||||
| WBVar00951256 | |||||||||
| WBVar02121035 | |||||||||
| WBVar02123250 | |||||||||
| WBVar01859974 | |||||||||
| WBVar02123100 | |||||||||
| WBVar02124214 | |||||||||
| WBVar01581859 | |||||||||
| WBVar01804168 | |||||||||
| WBVar01804169 | |||||||||
| WBVar01804170 | |||||||||
| WBVar02078382 | |||||||||
| WBVar00091023 | |||||||||
| WBVar01688330 | |||||||||
| WBVar00438752 | |||||||||
| WBVar00438753 | |||||||||
| WBVar01499492 | |||||||||
| WBVar01499493 | |||||||||
| WBVar01500245 | |||||||||
| WBVar01499325 | |||||||||
| WBVar02076004 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog (39) | |||||||||
| Structured_description | Automated_description | Enriched in g2L; g2R; and hypodermis based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by seven chemicals including Tunicamycin; D-glucose; and cholesterol based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C32H11.6 | |||||||
| Corresponding_transcript | C32H11.6.1 | ||||||||
| Associated_feature | WBsf998270 | ||||||||
| WBsf1018451 | |||||||||
| WBsf231071 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011496 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029436 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011487 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041713 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011494 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1145732 | ||||||||
| Expr2001325 | |||||||||
| Expr2019548 | |||||||||
| Drives_construct | WBCnstr00033422 | ||||||||
| Construct_product | WBCnstr00033422 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction (119) | |||||||||
| Map_info | Positive | Positive_clone | C32H11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 6.48992 | |||||||
| Method | Gene |
