WormBase Tree Display for Gene: WBGene00007837

WBGene00007837 SMap: S_parent: Sequence: C31C9
  Identity: Version: 2
    Name: CGC_name: fbxa-167 Person_evidence: WBPerson655
      Sequence_name: C31C9.3
      Molecular_name: C31C9.3
        C31C9.3.1
        CE08498
      Other_name: CELE_C31C9.3 Accession_evidence: NDB BX284602
      Public_name: fbxa-167
    DB_info: Database: AceView gene 2N931
        WormQTL gene WBGene00007837
        WormFlux gene WBGene00007837
        NDB locus_tag CELE_C31C9.3
        Panther gene CAEEL|WormBase=WBGene00007837|UniProtKB=O45285
          family PTHR23015
        NCBI gene 183082
        RefSeq protein NM_064468.2
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc O45285
        UniProt_GCRP UniProtAcc O45285
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Mar 2007 11:55:18 WBPerson2970 Name_change: CGC_name: fbxa-167
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (127)
    RNASeq_FPKM (74)
    GO_annotation: 00034150
    Ortholog (38)
    Paralog (224)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in body wall muscle cell; head mesodermal cell; hypodermis; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; hsf-1; and sek-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C31C9.3
    Corresponding_transcript: C31C9.3.1
    Other_sequence: CBC07959_1
      MJ04341
    Associated_feature: WBsf644810
      WBsf990478
      WBsf990479
      WBsf1013673
      WBsf1013674
      WBsf1013675
      WBsf222379
  Experimental_info: RNAi_result: WBRNAi00029383 Inferred_automatically: RNAi_primary
      WBRNAi00011433 Inferred_automatically: RNAi_primary
      WBRNAi00041605 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011742
      Expr1033397
      Expr1145630
      Expr2011493
      Expr2029730
    Drives_construct: WBCnstr00033445
    Construct_product: WBCnstr00033445
    Microarray_results (15)
    Expression_cluster (116)
    Interaction (19)
  Map_info: Map: II Position: 18.9877 Error: 0.055717
    Positive: Positive_clone: C31C9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene