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WormBase Tree Display for Gene: WBGene00007770

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Name Class

WBGene00007770SMapS_parentSequenceC27C7
IdentityVersion2
NameCGC_namenhr-259Person_evidenceWBPerson600
Sequence_nameC27C7.8
Molecular_nameC27C7.8
C27C7.8.1
CE18538
Other_nameCELE_C27C7.8Accession_evidenceNDBBX284601
Public_namenhr-259
DB_infoDatabaseAceViewgene1M25
WormQTLgeneWBGene00007770
WormFluxgeneWBGene00007770
NDBlocus_tagCELE_C27C7.8
PanthergeneCAEEL|WormBase=WBGene00007770|UniProtKB=Q9U3N8
familyPTHR46397
NCBIgene182960
RefSeqproteinNM_060521.3
TREEFAMTREEFAM_IDTF321941
TrEMBLUniProtAccQ9U3N8
UniProt_GCRPUniProtAccQ9U3N8
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
222 Jul 2005 10:29:12WBPerson2970Name_changeCGC_namenhr-259
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (15)
StrainWBStrain00036769
RNASeq_FPKM (74)
GO_annotation00100356
OrthologWBGene00162925Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00062097Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00148585Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00034413Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Csp5_scaffold_00371.g10309Caenorhabditis sinicaFrom_analysisWormBase-Compara
Pan_g1318Panagrellus redivivusFrom_analysisWormBase-Compara
chrI_pilon.g2266Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00301869Trichuris murisFrom_analysisWormBase-Compara
WBGene00301928Trichuris murisFrom_analysisWormBase-Compara
Paralog (43)
Structured_descriptionAutomated_descriptionPredicted to be located in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC27C7.8
Corresponding_transcriptC27C7.8.1
Associated_featureWBsf985286
WBsf1010714
WBsf218532
Experimental_infoRNAi_resultWBRNAi00041339Inferred_automaticallyRNAi_primary
WBRNAi00004907Inferred_automaticallyRNAi_primary
Expr_patternExpr1020776
Expr1145379
Drives_constructWBCnstr00033494
Construct_productWBCnstr00033494
Microarray_results (19)
Expression_cluster (66)
Interaction (93)
Map_infoMapIPosition8.64853Error0.017761
PositivePositive_cloneC27C7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene