WormBase Tree Display for Gene: WBGene00007770
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WBGene00007770 | SMap | S_parent | Sequence | C27C7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-259 | Person_evidence | WBPerson600 | |||||
Sequence_name | C27C7.8 | ||||||||
Molecular_name | C27C7.8 | ||||||||
C27C7.8.1 | |||||||||
CE18538 | |||||||||
Other_name | CELE_C27C7.8 | Accession_evidence | NDB | BX284601 | |||||
Public_name | nhr-259 | ||||||||
DB_info | Database | AceView | gene | 1M25 | |||||
WormQTL | gene | WBGene00007770 | |||||||
WormFlux | gene | WBGene00007770 | |||||||
NDB | locus_tag | CELE_C27C7.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007770|UniProtKB=Q9U3N8 | |||||||
family | PTHR46397 | ||||||||
NCBI | gene | 182960 | |||||||
RefSeq | protein | NM_060521.3 | |||||||
TREEFAM | TREEFAM_ID | TF321941 | |||||||
TrEMBL | UniProtAcc | Q9U3N8 | |||||||
UniProt_GCRP | UniProtAcc | Q9U3N8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-259 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (15) | |||||||||
Strain | WBStrain00036769 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00100356 | ||||||||
Ortholog | WBGene00162925 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
WBGene00062097 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
WBGene00148585 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
WBGene00034413 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00371.g10309 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
Pan_g1318 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
chrI_pilon.g2266 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00301869 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
WBGene00301928 | Trichuris muris | From_analysis | WormBase-Compara | ||||||
Paralog (43) | |||||||||
Structured_description | Automated_description | Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C27C7.8 | |||||||
Corresponding_transcript | C27C7.8.1 | ||||||||
Associated_feature | WBsf985286 | ||||||||
WBsf1010714 | |||||||||
WBsf218532 | |||||||||
Experimental_info | RNAi_result | WBRNAi00041339 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004907 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020776 | ||||||||
Expr1145379 | |||||||||
Drives_construct | WBCnstr00033494 | ||||||||
Construct_product | WBCnstr00033494 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (66) | |||||||||
Interaction (93) | |||||||||
Map_info | Map | I | Position | 8.64853 | Error | 0.017761 | |||
Positive | Positive_clone | C27C7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |