WormBase Tree Display for Gene: WBGene00007759
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| WBGene00007759 | SMap | S_parent | Sequence | C27A7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C27A7.9 | |||||||
| Molecular_name | C27A7.9 | ||||||||
| C27A7.9.1 | |||||||||
| CE34712 | |||||||||
| Other_name | CELE_C27A7.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C27A7.9 | ||||||||
| DB_info | Database | AceView | gene | 5M634 | |||||
| WormQTL | gene | WBGene00007759 | |||||||
| WormFlux | gene | WBGene00007759 | |||||||
| NDB | locus_tag | CELE_C27A7.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007759|UniProtKB=Q7YTR5 | |||||||
| family | PTHR31507 | ||||||||
| NCBI | gene | 3565527 | |||||||
| RefSeq | protein | NM_001028513.1 | |||||||
| TrEMBL | UniProtAcc | Q7YTR5 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YTR5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| Strain | WBStrain00037833 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00271659 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||||
| CSP28.g12080 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g881 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP31.g18073 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP32.g17866 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP38.g19146 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP40.g18115 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00007758 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00009406 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021591 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019059 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011618 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00044307 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00044306 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00043065 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in AVK based on RNA-seq studies. Is affected by several genes including clk-1; hpl-2; and mir-34 based on tiling array and microarray studies. Is predicted to encode a protein with the following domains: Thrombospondin type-1 (TSP1) repeat; Thrombospondin type-1 (TSP1) repeat superfamily; and Thrombospondin type 1 domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C27A7.9 | |||||||
| Corresponding_transcript | C27A7.9.1 | ||||||||
| Experimental_info | Expr_pattern | Expr1020781 | |||||||
| Expr1145358 | |||||||||
| Expr2019379 | |||||||||
| Drives_construct | WBCnstr00033503 | ||||||||
| Construct_product | WBCnstr00033503 | ||||||||
| Microarray_results | A_12_P118775 | ||||||||
| GPL13394_WBGene00007759 | |||||||||
| GPL13914_C27A7.9 | |||||||||
| GPL14144_C27A7.9_83-142_0.951_1_A | |||||||||
| GPL19516_CGZ0006213 | |||||||||
| GPL21109_C27A7.9 | |||||||||
| GPL8304_CE_WBGene00007759_A | |||||||||
| GPL8673_C27A7_9P00043 | |||||||||
| GPL8673_C27A7_9P00053 | |||||||||
| GPL8673_C27A7_9P00162 | |||||||||
| Expression_cluster (25) | |||||||||
| Map_info | Positive | Positive_clone | C27A7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 3.67879 | |||||||
| Method | Gene |
