WormBase Tree Display for Gene: WBGene00007686
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| WBGene00007686 | SMap | S_parent | Sequence | C18E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tomm-40 | Person_evidence | WBPerson304 | |||||
| Sequence_name | C18E9.6 | ||||||||
| Molecular_name | C18E9.6 | ||||||||
| C18E9.6.1 | |||||||||
| CE05298 | |||||||||
| Other_name | CELE_C18E9.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | tomm-40 | ||||||||
| DB_info | Database | AceView | gene | 2J262 | |||||
| WormQTL | gene | WBGene00007686 | |||||||
| WormFlux | gene | WBGene00007686 | |||||||
| NDB | locus_tag | CELE_C18E9.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007686|UniProtKB=Q18090 | |||||||
| family | PTHR10802 | ||||||||
| NCBI | gene | 174431 | |||||||
| RefSeq | protein | NM_063511.7 | |||||||
| SwissProt | UniProtAcc | Q18090 | |||||||
| TREEFAM | TREEFAM_ID | TF106204 | |||||||
| UniProt_GCRP | UniProtAcc | Q18090 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Apr 2010 11:09:36 | WBPerson2970 | Name_change | CGC_name | tomm-40 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tomm | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00001559 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (41) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein transmembrane transporter activity. Involved in protein import into mitochondrial matrix. Located in mitochondrial membrane. Expressed in gonadal sheath cell; intestine; pharyngeal muscle cell; and tail hypodermis. Human ortholog(s) of this gene implicated in cerebral infarction. Is an ortholog of human TOMM40 (translocase of outer mitochondrial membrane 40) and TOMM40L (translocase of outer mitochondrial membrane 40 like). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18001) | ||||
| Molecular_info | Corresponding_CDS | C18E9.6 | |||||||
| Corresponding_transcript | C18E9.6.1 | ||||||||
| Other_sequence (63) | |||||||||
| Associated_feature | WBsf988889 | ||||||||
| WBsf1012778 | |||||||||
| WBsf223577 | |||||||||
| WBsf223578 | |||||||||
| Experimental_info | RNAi_result (29) | ||||||||
| Expr_pattern | Chronogram814 | ||||||||
| Expr5306 | |||||||||
| Expr9321 | |||||||||
| Expr9322 | |||||||||
| Expr1012271 | |||||||||
| Expr1033321 | |||||||||
| Expr1144998 | |||||||||
| Expr2017455 | |||||||||
| Expr2035594 | |||||||||
| Drives_construct | WBCnstr00002399 | ||||||||
| WBCnstr00007833 | |||||||||
| WBCnstr00007834 | |||||||||
| WBCnstr00007835 | |||||||||
| WBCnstr00007837 | |||||||||
| WBCnstr00033555 | |||||||||
| Construct_product | WBCnstr00007834 | ||||||||
| WBCnstr00007835 | |||||||||
| WBCnstr00007837 | |||||||||
| WBCnstr00033555 | |||||||||
| Antibody | WBAntibody00003016 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (143) | |||||||||
| Interaction (156) | |||||||||
| Map_info | Map | II | Position | 0.944588 | Error | 0.002496 | |||
| Positive | Positive_clone | C18E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
