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WormBase Tree Display for Gene: WBGene00007652

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Name Class

WBGene00007652SMapS_parentSequenceC17G1
IdentityVersion1
NameSequence_nameC17G1.5
Molecular_nameC17G1.5
C17G1.5.1
CE31416
C17G1.5.2
Other_nameCELE_C17G1.5Accession_evidenceNDBBX284606
Public_nameC17G1.5
DB_infoDatabaseAceViewgeneXK563
WormQTLgeneWBGene00007652
WormFluxgeneWBGene00007652
NDBlocus_tagCELE_C17G1.5
NCBIgene181207
RefSeqproteinNM_077267.6
TrEMBLUniProtAccQ93241
UniProt_GCRPUniProtAccQ93241
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (91)
RNASeq_FPKM (74)
OrthologWBGene00063158Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00025117Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00145969Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00128146Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00222530Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3972Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10183Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g983Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17656Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20539Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25037Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12684Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6037Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5713Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20040Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00156.g5799Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C17G1.5Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13641Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00198.g6835Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01422Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023496Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01590Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15471Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0062500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19822Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00239974Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00259146Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including CAN; anterior hypodermis; excretory system; interfacial epithelial cell; and rectal gland cell based on Chronogram; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including eat-2; sek-1; and pgl-1 based on RNA-seq and microarray studies. Is affected by eleven chemicals including 1-methylnicotinamide; stavudine; and Zidovudine based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC17G1.5
Corresponding_CDS_historyC17G1.5:wp83
Corresponding_transcriptC17G1.5.1
C17G1.5.2
Other_sequenceFF678440.1
Hbac_isotig02913
CR12546
CRC00734_1
CR12545
HBC03167_1
Associated_featureWBsf648435
WBsf718682
WBsf1006574
WBsf1023643
WBsf236217
WBsf236218
Experimental_infoRNAi_resultWBRNAi00040832Inferred_automaticallyRNAi_primary
WBRNAi00029019Inferred_automaticallyRNAi_primary
Expr_patternChronogram1541
Expr1014657
Expr1033308
Expr1144875
Expr2000923
Expr2019144
Drives_constructWBCnstr00033579
Construct_productWBCnstr00033579
Microarray_results (20)
Expression_cluster (135)
Map_infoPositivePositive_cloneC17G1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX1.73122
MethodGene