WormBase Tree Display for Gene: WBGene00007633
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WBGene00007633 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C16D2.1 | |||||||
Molecular_name | C16D2.1a | ||||||||
C16D2.1a.1 | |||||||||
CE15622 | |||||||||
C16D2.1b | |||||||||
CE41203 | |||||||||
C16D2.1c | |||||||||
CE41204 | |||||||||
C16D2.1b.1 | |||||||||
C16D2.1c.1 | |||||||||
Other_name | CELE_C16D2.1 | Accession_evidence | NDB | BX284602 | |||||
Public_name | C16D2.1 | ||||||||
DB_info | Database | AceView | gene | 2J423 | |||||
WormQTL | gene | WBGene00007633 | |||||||
WormFlux | gene | WBGene00007633 | |||||||
NDB | locus_tag | CELE_C16D2.1 | |||||||
NCBI | gene | 174453 | |||||||
RefSeq | protein | NM_001393144.1 | |||||||
NM_063547.6 | |||||||||
NM_001129117.3 | |||||||||
TREEFAM | TREEFAM_ID | TF300142 | |||||||
TrEMBL | UniProtAcc | O62061 | |||||||
A5PEX1 | |||||||||
A5PEX0 | |||||||||
UniProt_GCRP | UniProtAcc | A5PEX0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (50) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00004895 | ||||||||
00004896 | |||||||||
00004897 | |||||||||
00004898 | |||||||||
00115733 | |||||||||
Contained_in_operon | CEOP2709 | ||||||||
Ortholog (21) | |||||||||
Paralog (14) | |||||||||
Structured_description | Automated_description | Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C16D2.1a | |||||||
C16D2.1b | |||||||||
C16D2.1c | |||||||||
Corresponding_transcript | C16D2.1a.1 | ||||||||
C16D2.1b.1 | |||||||||
C16D2.1c.1 | |||||||||
Other_sequence | CBC02189_1 | ||||||||
CSC00709_1 | |||||||||
FD517137.1 | |||||||||
Associated_feature | WBsf221851 | ||||||||
Experimental_info | RNAi_result | WBRNAi00054081 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00068686 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112709 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112999 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00069058 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00107061 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00064660 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112711 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00069059 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00069060 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00113229 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00069057 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112710 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112713 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00113118 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00068685 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092022 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010862 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00088603 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001429 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019174 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040727 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112712 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00088710 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035935 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028970 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1010681 | ||||||||
Expr1144770 | |||||||||
Expr2000874 | |||||||||
Expr2019092 | |||||||||
Drives_construct | WBCnstr00033591 | ||||||||
Construct_product | WBCnstr00033591 | ||||||||
Microarray_results | SMD_C16D2.1 | ||||||||
SMD_T24H10.2 | |||||||||
179049_at | |||||||||
188946_at | |||||||||
A_12_P105129 | |||||||||
A_12_P111123 | |||||||||
A_12_P141200 | |||||||||
A_12_P143485 | |||||||||
A_12_P143486 | |||||||||
A_12_P143487 | |||||||||
A_12_P143488 | |||||||||
A_12_P143489 | |||||||||
A_12_P159380 | |||||||||
A_12_P159381 | |||||||||
A_12_P159382 | |||||||||
A_12_P159383 | |||||||||
A_12_P159384 | |||||||||
Aff_C16D2.1 | |||||||||
Aff_T24H10.2 | |||||||||
GPL13394_WBGene00007633 | |||||||||
GPL13394_WBGene00012005 | |||||||||
GPL13914_C16D2.1 | |||||||||
GPL13914_T24H10.7 | |||||||||
GPL14144_C16D2.1a_329-388_0.923_7_B | |||||||||
GPL14144_C16D2.1a_447-506_0.934_4_C | |||||||||
GPL14144_C16D2.1a_496-555_0.971_1_A | |||||||||
GPL14144_T24H10.7a_910-969_0.931_1_A | |||||||||
GPL19516_CGZ0004937 | |||||||||
GPL19516_CGZ0004938 | |||||||||
GPL19516_CGZ0004939 | |||||||||
GPL19516_CGZ0036709 | |||||||||
GPL19516_CGZ0036710 | |||||||||
GPL19516_CGZ0036711 | |||||||||
GPL19516_CGZ0036712 | |||||||||
GPL19516_CGZ0036713 | |||||||||
GPL21109_C16D2.1a | |||||||||
GPL21109_T24H10.7a | |||||||||
GPL3518_CE15622 | |||||||||
GPL3518_CE16461 | |||||||||
GPL8304_CE_WBGene00007633_A | |||||||||
GPL8304_CE_WBGene00007633_B | |||||||||
GPL8304_CE_WBGene00007633_C | |||||||||
GPL8304_CE_WBGene00012005_B | |||||||||
GPL8673_C16D2_1P00069 | |||||||||
GPL8673_C16D2_1P00450 | |||||||||
GPL8673_C16D2_1P00523 | |||||||||
GPL9450_C16D2.1 | |||||||||
GPL9450_T24H10.2 | |||||||||
cea2.c.14445 | |||||||||
cea2.p.30512 | |||||||||
Expression_cluster (182) | |||||||||
Interaction (41) | |||||||||
Map_info | Positive | Positive_clone | C16D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 1.04868 | |||||||
Reference | WBPaper00038231 | ||||||||
WBPaper00038321 | |||||||||
WBPaper00059970 | |||||||||
Method | Gene |