WormBase Tree Display for Gene: WBGene00007633

WBGene00007633 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 1
    Name: Sequence_name: C16D2.1
      Molecular_name: C16D2.1a
        C16D2.1a.1
        CE15622
        C16D2.1b
        CE41203
        C16D2.1c
        CE41204
        C16D2.1b.1
        C16D2.1c.1
      Other_name: CELE_C16D2.1 Accession_evidence: NDB BX284602
      Public_name: C16D2.1
    DB_info: Database: AceView gene 2J423
        WormQTL gene WBGene00007633
        WormFlux gene WBGene00007633
        NDB locus_tag CELE_C16D2.1
        NCBI gene 174453
        RefSeq protein NM_001393144.1
            NM_063547.6
            NM_001129117.3
        TREEFAM TREEFAM_ID TF300142
        TrEMBL UniProtAcc O62061
            A5PEX1
            A5PEX0
        UniProt_GCRP UniProtAcc A5PEX0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (50)
    RNASeq_FPKM (74)
    GO_annotation: 00004895
      00004896
      00004897
      00004898
      00115733
    Contained_in_operon: CEOP2709
    Ortholog (21)
    Paralog (14)
    Structured_description: Automated_description: Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C16D2.1a
      C16D2.1b
      C16D2.1c
    Corresponding_transcript: C16D2.1a.1
      C16D2.1b.1
      C16D2.1c.1
    Other_sequence: CBC02189_1
      CSC00709_1
      FD517137.1
    Associated_feature: WBsf221851
  Experimental_info: RNAi_result (26)
    Expr_pattern: Expr1010681
      Expr1144770
      Expr2000874
      Expr2019092
    Drives_construct: WBCnstr00033591
    Construct_product: WBCnstr00033591
    Microarray_results: SMD_C16D2.1
      SMD_T24H10.2
      179049_at
      188946_at
      A_12_P105129
      A_12_P111123
      A_12_P141200
      A_12_P143485
      A_12_P143486
      A_12_P143487
      A_12_P143488
      A_12_P143489
      A_12_P159380
      A_12_P159381
      A_12_P159382
      A_12_P159383
      A_12_P159384
      Aff_C16D2.1
      Aff_T24H10.2
      GPL13394_WBGene00007633
      GPL13394_WBGene00012005
      GPL13914_C16D2.1
      GPL13914_T24H10.7
      GPL14144_C16D2.1a_329-388_0.923_7_B
      GPL14144_C16D2.1a_447-506_0.934_4_C
      GPL14144_C16D2.1a_496-555_0.971_1_A
      GPL14144_T24H10.7a_910-969_0.931_1_A
      GPL19516_CGZ0004937
      GPL19516_CGZ0004938
      GPL19516_CGZ0004939
      GPL19516_CGZ0036709
      GPL19516_CGZ0036710
      GPL19516_CGZ0036711
      GPL19516_CGZ0036712
      GPL19516_CGZ0036713
      GPL21109_C16D2.1a
      GPL21109_T24H10.7a
      GPL3518_CE15622
      GPL3518_CE16461
      GPL8304_CE_WBGene00007633_A
      GPL8304_CE_WBGene00007633_B
      GPL8304_CE_WBGene00007633_C
      GPL8304_CE_WBGene00012005_B
      GPL8673_C16D2_1P00069
      GPL8673_C16D2_1P00450
      GPL8673_C16D2_1P00523
      GPL9450_C16D2.1
      GPL9450_T24H10.2
      cea2.c.14445
      cea2.p.30512
    Expression_cluster (182)
    Interaction: WBInteraction000030600
      WBInteraction000174675
      WBInteraction000187976
      WBInteraction000189078
      WBInteraction000200089
      WBInteraction000217202
      WBInteraction000224262
      WBInteraction000226162
      WBInteraction000227647
      WBInteraction000228691
      WBInteraction000249538
      WBInteraction000250349
      WBInteraction000262744
      WBInteraction000269933
      WBInteraction000281273
      WBInteraction000289905
      WBInteraction000294981
      WBInteraction000313613
      WBInteraction000325783
      WBInteraction000327546
      WBInteraction000338971
      WBInteraction000341855
      WBInteraction000346640
      WBInteraction000347471
      WBInteraction000352184
      WBInteraction000360592
      WBInteraction000362403
      WBInteraction000366121
      WBInteraction000366463
      WBInteraction000370678
      WBInteraction000372972
      WBInteraction000391971
      WBInteraction000392778
      WBInteraction000394144
      WBInteraction000397533
      WBInteraction000420481
      WBInteraction000420951
      WBInteraction000425222
      WBInteraction000438987
      WBInteraction000443172
      WBInteraction000449259
  Map_info: Positive: Positive_clone: C16D2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 1.04868
  Reference: WBPaper00038231
    WBPaper00038321
    WBPaper00059970
  Method: Gene